RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CRLF1O75462 422 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 IFNA2P01563 188 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 IGHV3-7P01780 117 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 IGKV1-13P0DP09 117 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 GNRHRP30968 328 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 RAG2P55895 527 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 PIGPP57054 158 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 RPL15P61313 204 aaKnown RBP7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 HABP2Q14520 560 aaPredicted RBP7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 TMEM128Q5BJH2 165 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 FAAP20Q6NZ36 180 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 PLET1Q6UQ28 207 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 MOB3BQ86TA1 216 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 SGPP2Q8IWX5 399 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 ODF3L1Q8IXM7 274 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 CENPSQ8N2Z9 138 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 OR13C8Q8NGS7 320 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 OR2T10Q8NGZ9 312 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 OR4S2Q8NH73 311 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 MARCH1Q8TCQ1 289 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 ZFAND2BQ8WV99 257 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 TCTEX1D2Q8WW35 142 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 NABP2Q9BQ15 211 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 PARP12Q9H0J9 701 aaKnown RBP7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 SLC2A9Q9NRM0 540 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 C1RLQ9NZP8 487 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 RNF150Q9ULK6 438 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 GPR132Q9UNW8 380 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 WASHC3Q9Y3C0 194 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 HILPDAQ9Y5L2 63 aa7.9□□□□□ -1.14
SMARCD1-206ENST00000549274 IGHV3OR16-10A0A075B7F0 116 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 TEX13DA0A0J9YY54 714 aaPredicted RBP7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 A0A0U1RQK1 487 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 A0A1W2PPE3 182 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 A0A1W2PPI3 338 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 CYSRT1A8MQ03 144 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 PLA2G10O15496 165 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 CREBL2O60519 120 aaPredicted RBP7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 SPDEFO95238 335 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 TCRBP04435 133 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 DUTP33316 252 aaKnown RBP7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 DLX1P56177 255 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 DHODHQ02127 395 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 RGS21Q2M5E4 152 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 RUSC1-AS1Q66K80 236 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 ZNF818PQ6ZRF7 136 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 C5orf24Q7Z6I8 188 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 LHFPL4Q7Z7J7 247 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 DUSP18Q8NEJ0 188 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 OR5AN1Q8NGI8 311 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 OR4C13Q8NGP0 309 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 OSR1Q8TAX0 266 aaPredicted RBP7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 TSNAXQ99598 290 aaKnown RBP7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 SMR3AQ99954 134 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 ZNF251Q9BRH9 671 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 CCL28Q9NRJ3 127 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 SLC35D1Q9NTN3 355 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 COMMD9Q9P000 198 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 TBC1D24Q9ULP9 559 aa7.89□□□□□ -1.15
SMARCD1-206ENST00000549274 CRYM-AS1A6NIL9 109 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 INAFM1C9JVW0 142 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 H0Y980 276 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 H7C2Y5 167 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 TIMM23O14925 209 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 MPPED1O15442 326 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 PRAF2O60831 178 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 PGLYRP1O75594 196 aaPredicted RBP7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 DHFRP00374 187 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 MOSP00540 346 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 HRASP01112 189 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 RLN1P04808 185 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 SERPINE2P07093 398 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 F2RP25116 425 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 LGALS7P47929 136 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 ERVK-16P61578 105 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 DEFB112Q30KQ8 113 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 RPL39P5Q59GN2 51 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 Q6YL49 198 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 CADM3Q8N126 398 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 VSTM2AQ8TAG5 236 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 FLYWCH2Q96CP2 140 aaKnown RBP7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 GALNT14Q96FL9 552 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 AJUBAQ96IF1 538 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 SSX3Q99909 188 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 MRPL20Q9BYC9 149 aaKnown RBP7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 C20orf85Q9H1P6 137 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 GPN1Q9HCN4 374 aaPredicted RBP7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 KIAA1456Q9P272 454 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 CACFD1Q9UGQ2 172 aa7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 NSD1Q96L73 2696 aaPredicted RBP7.88□□□□□ -1.15
SMARCD1-206ENST00000549274 C3orf85A0A1B0GTC6 90 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 DUXBA0A1W2PPF3 345 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 FAM90A9PA6NNJ1 464 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 H0YJW9 148 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 CLDN34H7C241 214 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 VENTXO95231 258 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 HPRT1P00492 218 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
SMARCD1-206ENST00000549274 CT45A6P0DMU7 189 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms