RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 SSTR5P35346 364 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 FAUP35544 74 aaKnown RBP10.45□□□□□ -0.74
CDX2-202ENST00000548877 REG1BP48304 166 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 ZNF137PP52743 207 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 F2RL1P55085 397 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 ARL6IP1Q15041 203 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 Q3ZCU0 254 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 DLX4Q92988 240 aaPredicted RBP10.45□□□□□ -0.74
CDX2-202ENST00000548877 S100A13Q99584 98 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 URM1Q9BTM9 101 aaKnown RBP10.45□□□□□ -0.74
CDX2-202ENST00000548877 CST11Q9H112 138 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 MRPS28Q9Y2Q9 187 aaKnown RBP10.45□□□□□ -0.74
CDX2-202ENST00000548877 RBMX2Q9Y388 322 aaKnown RBP10.45□□□□□ -0.74
CDX2-202ENST00000548877 TNCP24821 2201 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 LINC00854A0A1B0GVQ3 168 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 A0A1W2PPE3 182 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 TXNL1O43396 289 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 ORC5O43913 435 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 RBBP9O75884 186 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 GZMHP20718 246 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 PRSS3P35030 304 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 RFX2P48378 723 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 RAB9AP51151 201 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 ACTBP60709 375 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 GPR176Q14439 515 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 IL13RA2Q14627 380 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 LTC4SQ16873 150 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 PAN3Q58A45 887 aaKnown RBP10.44□□□□□ -0.74
CDX2-202ENST00000548877 TMEM65Q6PI78 240 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 OR5D18Q8NGL1 313 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 PLPPR1Q8TBJ4 325 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 MRGPRDQ8TDS7 321 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 SPACA5Q96QH8 159 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 SPATA25Q9BR10 227 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 GHITMQ9H3K2 345 aa10.44□□□□□ -0.74
CDX2-202ENST00000548877 ZNF107Q9UII5 783 aaPredicted RBP10.44□□□□□ -0.74
CDX2-202ENST00000548877 TRAV18A0A075B6X5 111 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 ZNF736B4DX44 427 aaPredicted RBP10.43□□□□□ -0.74
CDX2-202ENST00000548877 C15orf65H3BRN8 121 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 ZNF780AO75290 641 aaPredicted RBP10.43□□□□□ -0.74
CDX2-202ENST00000548877 OR8U9P0C7N5 309 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 KISS1Q15726 138 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 FAM53AQ6NSI3 398 aaPredicted RBP10.43□□□□□ -0.74
CDX2-202ENST00000548877 GLIPR1L1Q6UWM5 242 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 ZNF554Q86TJ5 538 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 PXT1Q8NFP0 134 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 TOLLIPQ9H0E2 274 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 HERC2O95714 4834 aa10.43□□□□□ -0.74
CDX2-202ENST00000548877 TMEM14DPA8MWL7 114 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 LINC01619G3V211 115 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 HSPB6O14558 160 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 HSPA12AO43301 675 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 CD3GP09693 182 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 IL3RAP26951 378 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 KLF9Q13886 244 aaPredicted RBP10.42□□□□□ -0.74
CDX2-202ENST00000548877 C19orf54Q5BKX5 351 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 OR52I2Q8NH67 350 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 CHAC2Q8WUX2 184 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 TMEM59Q9BXS4 323 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 IFT22Q9H7X7 185 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 GFOD1Q9NXC2 390 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 MTFP1Q9UDX5 166 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 NUBP2Q9Y5Y2 271 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 FRAS1Q86XX4 4008 aa10.42□□□□□ -0.74
CDX2-202ENST00000548877 ANKRD20A5PA0PJZ0 165 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 G3V318 75 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 ARPC1BO15143 372 aaKnown RBP10.41□□□□□ -0.74
CDX2-202ENST00000548877 HLA-DRB1P01911 266 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 TRAPPC2P0DI81 140 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 TRAPPC2BP0DI82 140 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 TMEM225BP0DP42 221 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 SLURP1P55000 103 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 QRFPP83859 136 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 SRSF7Q16629 238 aaKnown RBP eCLIP10.41□□□□□ -0.74
CDX2-202ENST00000548877 SLC25A48Q6ZT89 311 aaKnown RBP10.41□□□□□ -0.74
CDX2-202ENST00000548877 ZNF439Q8NDP4 499 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 TNFAIP8L1Q8WVP5 186 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 OR5B12Q96R08 314 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 MARVELD1Q9BSK0 173 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 AUNIPQ9H7T9 357 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 WSB1Q9Y6I7 421 aa10.41□□□□□ -0.74
CDX2-202ENST00000548877 TRAV39A0A0B4J263 110 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 LANCL1O43813 399 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 DHFRP00374 187 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 IFNA6P05013 189 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 HNRNPCP07910 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
CDX2-202ENST00000548877 GSTP1P09211 210 aaKnown RBP10.4□□□□□ -0.74
CDX2-202ENST00000548877 RCVRNP35243 200 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 CRIP2P52943 208 aaPredicted RBP10.4□□□□□ -0.74
CDX2-202ENST00000548877 HAGHQ16775 308 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 ASCL4Q6XD76 172 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 SGPP2Q8IWX5 399 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 CADM3Q8N126 398 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 OR10R2Q8NGX6 335 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 GPX8Q8TED1 209 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 ARPC1AQ92747 370 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms