RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 KMT2CQ8NEZ4 4911 aaKnown RBP16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 TRAV38-1A0A0B4J264 116 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 DNAJC9-AS1A6NH13 148 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 BCL2L11O43521 198 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 CYB5R3P00387 301 aaPredicted RBP16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 RLN2P04090 185 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 CGB3P0DN86 165 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 CGB7P0DN87 165 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 NUP62P37198 522 aaPredicted RBP16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 CCL8P80075 99 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 EXOSC2Q13868 293 aaKnown RBP16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 ZNF645Q8N7E2 425 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 SLC35G3Q8N808 338 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 DCUN1D4Q92564 292 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 RBPMSQ93062 196 aaKnown RBP16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 ARL11Q969Q4 196 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 ABHD14BQ96IU4 210 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 GAFA1Q96PS6 74 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 AQP10Q96PS8 301 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 DUX5Q96PT3 197 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 SAP30LQ9HAJ7 183 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 FAM212BQ9NTI7 297 aaPredicted RBP16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 GSKIPQ9P0R6 139 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 JPT1Q9UK76 154 aa16.34■□□□□ 0.21
CTDSP2-204ENST00000548823 KANTRA0A1W2PQU2 76 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 F2RL2O00254 374 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 SIGLEC5O15389 551 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 VDAC1P21796 283 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 GATA3P23771 443 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 HTR2BP41595 481 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 SMCO1Q147U7 214 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 TMEM30BQ3MIR4 351 aa16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 LIN7CQ9NUP9 197 aaKnown RBP16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 RBM7Q9Y580 266 aaKnown RBP16.33■□□□□ 0.2
CTDSP2-204ENST00000548823 TMEM178BH3BS89 294 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 ITGB1BP1O14713 200 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 RNASE1P07998 156 aaKnown RBP16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 OR8U9P0C7N5 309 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 SLC25A6P12236 298 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 EDDM3AQ14507 147 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 DRAM1Q8N682 238 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 TCTEX1D1Q8N7M0 179 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 ZNRF1Q8ND25 227 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 OR8U1Q8NH10 309 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 OR1S1Q8NH92 325 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 CORO2AQ92828 525 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 RAB39BQ96DA2 213 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 C7orf69Q9H7B7 122 aa16.32■□□□□ 0.2
CTDSP2-204ENST00000548823 NKX6-3A6NJ46 265 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 YPEL1O60688 119 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 DEDDO75618 318 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 CFDP00746 253 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 NMSQ5H8A3 153 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 CLLU1Q5K131 121 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 FAM201AQ5SY85 155 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 OR52L2PQ8NGH6 319 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 OR4D5Q8NGN0 318 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 EDARADDQ8WWZ3 215 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 YPEL2Q96QA6 119 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 LINC00574Q9H8X3 128 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 OR2S2Q9NQN1 319 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 OR5AC2Q9NZP5 309 aa16.31■□□□□ 0.2
CTDSP2-204ENST00000548823 FSTL3O95633 263 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 MDKP21741 143 aaPredicted RBP16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 SSTR5P35346 364 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 EIF4EBP1Q13541 118 aaPredicted RBP16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 SLC7A5P1Q8MH63 180 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 TPRX1Q8N7U7 411 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 UBALD1Q8TB05 177 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 SCARB1Q8WTV0 552 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 ARPC5LQ9BPX5 153 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 PARP12Q9H0J9 701 aaKnown RBP16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 PLEKHA2Q9HB19 425 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 TMEM106BQ9NUM4 274 aa16.3■□□□□ 0.2
CTDSP2-204ENST00000548823 PPIAL4EA0A075B759 164 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 E5RGE8 158 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 PPIAL4DF5H284 164 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 TNFRSF13BO14836 293 aaPredicted RBP16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 MBPP02686 304 aaPredicted RBP16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 SERPINE2P07093 398 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 PPIAL4FP0DN26 164 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 S100A1P23297 94 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 AP2S1P53680 142 aaPredicted RBP16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 S100A10P60903 97 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 LSM10Q969L4 123 aaKnown RBP16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 RRNAD1Q96FB5 475 aaKnown RBP16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 PHYHIPLQ96FC7 376 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 NSG2Q9Y328 171 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 MMP24Q9Y5R2 645 aa16.29■□□□□ 0.2
CTDSP2-204ENST00000548823 CLDN34H7C241 214 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 K7EPK0 472 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 ST8SIA3O43173 380 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 GNMTQ14749 295 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 ZNF66Q6ZN08 573 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 FAM71E2Q8N5Q1 922 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 DCTN5Q9BTE1 182 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 CALYQ9NYX4 217 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 GAB2Q9UQC2 676 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 POMT1Q9Y6A1 747 aa16.28■□□□□ 0.2
CTDSP2-204ENST00000548823 ARHGAP32A7KAX9 2087 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms