RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SMIM4Q8WVI0 70 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 COPZ2Q9P299 210 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 GNG12Q9UBI6 72 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 VSIG4Q9Y279 399 aa12.75□□□□□ -0.37
SSH1-208ENST00000548522 A0A0A6YYH2 397 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 A0A1W2PPK0 400 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 A6NJ64 397 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 SAP30O75446 220 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 OR5H8P0DN80 308 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 INSL3P51460 131 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 NDPQ00604 133 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 RUNX1Q01196 453 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 GNMTQ14749 295 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 SLC22A6Q4U2R8 563 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 GLT8D1Q68CQ7 371 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 OR4K15Q8NH41 348 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
SSH1-208ENST00000548522 PTX4Q96A99 478 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 S100A16Q96FQ6 103 aaKnown RBP12.74□□□□□ -0.37
SSH1-208ENST00000548522 THAP7Q9BT49 309 aaPredicted RBP12.74□□□□□ -0.37
SSH1-208ENST00000548522 METTL9Q9H1A3 318 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 SORL1Q92673 2214 aa12.74□□□□□ -0.37
SSH1-208ENST00000548522 TRAV8-7A0A075B6U6 113 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 IGHV7-81A0A0B4J1V7 117 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 GABARAPH6UMI1 98 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 OVOL1O14753 267 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 TXNL1O43396 289 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 HBZP02008 142 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 CSTBP04080 98 aaKnown RBP12.73□□□□□ -0.37
SSH1-208ENST00000548522 BLVRBP30043 206 aaPredicted RBP12.73□□□□□ -0.37
SSH1-208ENST00000548522 ZNF93P35789 620 aaPredicted RBP12.73□□□□□ -0.37
SSH1-208ENST00000548522 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 TMEM65Q6PI78 240 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 PLET1Q6UQ28 207 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 HAPLN4Q86UW8 402 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 ZNF429Q86V71 674 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 ARPC1AQ92747 370 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 SLC25A38Q96DW6 304 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 ABHD1Q96SE0 405 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 MARVELD1Q9BSK0 173 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 MRPL20Q9BYC9 149 aaKnown RBP12.73□□□□□ -0.37
SSH1-208ENST00000548522 OR51J1Q9H342 316 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 RCC2Q9P258 522 aaKnown RBP12.73□□□□□ -0.37
SSH1-208ENST00000548522 RBMX2Q9Y388 322 aaKnown RBP12.73□□□□□ -0.37
SSH1-208ENST00000548522 FBXO7Q9Y3I1 522 aa12.73□□□□□ -0.37
SSH1-208ENST00000548522 TRAV41A0A0B4J266 112 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 FAM90A10PA6NDY2 464 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 CENPXA8MT69 81 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 SOX15O60248 233 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 GP9P14770 177 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 RCC1P18754 421 aaPredicted RBP12.72□□□□□ -0.37
SSH1-208ENST00000548522 HLA-DMAP28067 261 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 RAB9AP51151 201 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 AP3S2P59780 193 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 ACTBP60709 375 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 SSBP1Q04837 148 aaKnown RBP12.72□□□□□ -0.37
SSH1-208ENST00000548522 PLECQ15149 4684 aaKnown RBP12.72□□□□□ -0.37
SSH1-208ENST00000548522 Q3ZCU0 254 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 C1orf100Q5SVJ3 147 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 LINC00596Q86U02 117 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 TMEM138Q9NPI0 162 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
SSH1-208ENST00000548522 NAP1L6A6NFF2 107 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 SPINT2O43291 252 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 LANCL1O43813 399 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 HLA-DRB1P01911 266 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 RAB11BQ15907 218 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 SRSF7Q16629 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
SSH1-208ENST00000548522 ECSCRQ19T08 205 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 HES5Q5TA89 166 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 AKAP14Q86UN6 197 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 LYPD6Q86Y78 171 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 ODF3L1Q8IXM7 274 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.37
SSH1-208ENST00000548522 IGHV4OR15-8A0A075B7B6 117 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 A0A087WW49 117 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 FAM240BA0A1B0GVZ2 78 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 XRCC3O43542 346 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 SCGNO76038 276 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 GSTT2BP0CG30 244 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 GTF2F2P13984 249 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 RAB6AP20340 208 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 BDKRB2P30411 391 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 C19orf54Q5BKX5 351 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 ZNF57Q68EA5 555 aaPredicted RBP12.7□□□□□ -0.38
SSH1-208ENST00000548522 RAB12Q6IQ22 244 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 ADAMTSL5Q6ZMM2 481 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 GAPTQ8N292 157 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 OR52L2PQ8NGH6 319 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 NABP2Q9BQ15 211 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 TOLLIPQ9H0E2 274 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 TPSG1Q9NRR2 321 aa12.7□□□□□ -0.38
SSH1-208ENST00000548522 HMX3A6NHT5 357 aa12.69□□□□□ -0.38
SSH1-208ENST00000548522 SULT1C2O00338 296 aa12.69□□□□□ -0.38
SSH1-208ENST00000548522 NBR2O15453 112 aa12.69□□□□□ -0.38
SSH1-208ENST00000548522 PPP1CCP36873 323 aaKnown RBP12.69□□□□□ -0.38
SSH1-208ENST00000548522 OR3A3P47888 321 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms