RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZNF134P52741 427 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 RPL30P62888 115 aaKnown RBP11.06□□□□□ -0.64
PTCH1-215ENST00000547672 RPP30P78346 268 aaKnown RBP11.06□□□□□ -0.64
PTCH1-215ENST00000547672 PRAMEF5Q5TYX0 476 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 DUX4L9Q6RFH8 374 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-215ENST00000547672 BTNL3Q6UXE8 466 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 TCF23Q7RTU1 214 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 STX12Q86Y82 276 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 PDZD9Q8IXQ8 264 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 OR10X1Q8NGY0 326 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF596Q8TC21 504 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 PATZ1Q9HBE1 687 aaKnown RBP11.06□□□□□ -0.64
PTCH1-215ENST00000547672 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
PTCH1-215ENST00000547672 CTSZQ9UBR2 303 aa11.06□□□□□ -0.64
PTCH1-215ENST00000547672 DSCAML1Q8TD84 2053 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 PPIAL4CA0A0B4J2A2 164 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 LINC00862A6NCI5 91 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 CHST1O43916 411 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 SPDEFO95238 335 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 IGKV1-39P01597 117 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 IGKV1-5P01602 117 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 APOA2P02652 100 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 IGKV1D-39P04432 117 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 PPIAL4GP0DN37 164 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 MC5RP33032 325 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 CAV2P51636 162 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 POLR2GP62487 172 aaKnown RBP eCLIP11.05□□□□□ -0.64
PTCH1-215ENST00000547672 GNB2P62879 340 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF816Q0VGE8 651 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF266Q14584 549 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF273Q14593 569 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 MIDNQ504T8 468 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 CXorf66Q5JRM2 361 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-215ENST00000547672 WDR25Q64LD2 544 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-215ENST00000547672 NCR3LG1Q68D85 454 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF843Q8N446 348 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 DMBX1Q8NFW5 382 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 R3HDM4Q96D70 268 aa11.05□□□□□ -0.64
PTCH1-215ENST00000547672 BARX1Q9HBU1 254 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-215ENST00000547672 AMMECR1Q9Y4X0 333 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-215ENST00000547672 BSNQ9UPA5 3926 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 HIVEP3Q5T1R4 2406 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 BAHCC1Q9P281 2608 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 SAA2-SAA4A0A096LPE2 208 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 LINC00473A8K010 186 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 LYNX1G3V0Z9 82 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 J3QR06 171 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 SSSCA1O60232 199 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 RBMXL2O75526 392 aaKnown RBP11.04□□□□□ -0.64
PTCH1-215ENST00000547672 DFFBO76075 338 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 SAA2P0DJI9 122 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-215ENST00000547672 IGHV1-8P0DP01 117 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 LYNX1P0DP58 116 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 ERVFRD-1P60508 538 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 HBG1P69891 147 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 HBG2P69892 147 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 C1orf122Q6ZSJ8 110 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 OR4A16Q8NH70 328 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 PCGF1Q9BSM1 259 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 TMEM133Q9H2Q1 129 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 MED9Q9NWA0 146 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 FKBP11Q9NYL4 201 aa11.04□□□□□ -0.64
PTCH1-215ENST00000547672 ROS1P08922 2347 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 NBASA2RRP1 2371 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 LOC105371242A0A075B767 164 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 MEX3AA1L020 520 aaKnown RBP11.03□□□□□ -0.64
PTCH1-215ENST00000547672 MARCH11A6NNE9 402 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 C19orf84I3L1E1 186 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 M0R1W7 72 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 TXNL1O43396 289 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 RAMP3O60896 148 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 S1PR2O95136 353 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 CFDP00746 253 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-215ENST00000547672 P0C879 139 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 G6PCP35575 357 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 GNG10P50151 68 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 RAB13P51153 203 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 DLX6P56179 175 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 UBE2KP61086 200 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 TNFRSF9Q07011 255 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 ZNF833PQ6ZTB9 187 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 ABHD12Q8N2K0 398 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 LY6G5BQ8NDX9 201 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 OR13D1Q8NGV5 346 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
PTCH1-215ENST00000547672 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 DDB2Q92466 427 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 HSPB7Q9UBY9 170 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 PFDN2Q9UHV9 154 aa11.03□□□□□ -0.64
PTCH1-215ENST00000547672 MSGN1A6NI15 193 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 NUDT19A8MXV4 375 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 OVOL3O00110 214 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 CCL3L1P16619 93 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 PDLIM4P50479 330 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 ZNF137PP52743 207 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms