RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 SNX22Q96L94 193 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 ZNF665Q9H7R5 613 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 IGHV3OR15-7A0A075B7D8 119 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 ZG16O60844 167 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 OR2C1O95371 312 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 BCL2P10415 239 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 NKX6-1P78426 367 aaPredicted RBP12.92□□□□□ -0.34
BRF1-212ENST00000547562 SPRNQ5BIV9 151 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 PPP1R35Q8TAP8 253 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 MUCL1Q96DR8 90 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 MEGF10Q96KG7 1140 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 NIPSNAP3BQ9BS92 247 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 CISD1Q9NZ45 108 aaKnown RBP12.92□□□□□ -0.34
BRF1-212ENST00000547562 DSCAMO60469 2012 aa12.92□□□□□ -0.34
BRF1-212ENST00000547562 RP1L1Q8IWN7 2480 aaPredicted RBP12.92□□□□□ -0.34
BRF1-212ENST00000547562 ZFP92A6NM28 416 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 MARCH11A6NNE9 402 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 CD55P08174 381 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 MAS1LP35410 378 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 GPR12P47775 334 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 FGF8P55075 233 aaPredicted RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 ELLP55199 621 aaPredicted RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 ATP6V1FQ16864 119 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 CR1LQ2VPA4 569 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 MORN2Q502X0 79 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 MOGAT3Q86VF5 341 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 ZDHHC16Q969W1 377 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 TVP23CQ96ET8 276 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 YPEL4Q96NS1 127 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 CIB3Q96Q77 187 aaPredicted RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 MRPL37Q9BZE1 423 aaKnown RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 GNG12Q9UBI6 72 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 JPT1Q9UK76 154 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 DSCAML1Q8TD84 2053 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 LAMA5O15230 3695 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 PLCE1Q9P212 2302 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 ICE1Q9Y2F5 2266 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 MGAQ8IWI9 3026 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 PMS2P5A8MQ11 134 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 IFNA4P05014 189 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 DUTP33316 252 aaKnown RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 TIMP3P35625 211 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 TAGLN2P37802 199 aaKnown RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 DLK1P80370 383 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
BRF1-212ENST00000547562 MALSU1Q96EH3 234 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 TMEM147Q9BVK8 224 aa12.91□□□□□ -0.34
BRF1-212ENST00000547562 CUL9Q8IWT3 2517 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 A0A087WWC5 75 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 PROP1O75360 226 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 RBMXL2O75526 392 aaKnown RBP12.9□□□□□ -0.34
BRF1-212ENST00000547562 TCF15Q12870 199 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 NCR3LG1Q68D85 454 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 VHLLQ6RSH7 139 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 SLC35E3Q7Z769 313 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 RBMXL3Q8N7X1 1067 aaKnown RBP12.9□□□□□ -0.34
BRF1-212ENST00000547562 ZNRF1Q8ND25 227 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 FAM216AQ8WUB2 273 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 IGLV3-9A0A075B6K5 115 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 MAP1LC3B2A6NCE7 125 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 SPRY3O43610 288 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 YPEL1O60688 119 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 LHBP01229 141 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 SNRPEP62304 92 aaKnown RBP12.9□□□□□ -0.34
BRF1-212ENST00000547562 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 PLPPR2Q96GM1 343 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 YPEL2Q96QA6 119 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 AKAP13Q12802 2813 aa12.9□□□□□ -0.34
BRF1-212ENST00000547562 TANC2Q9HCD6 1990 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
BRF1-212ENST00000547562 RAB11AP62491 216 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 R3HDM4Q96D70 268 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 SFXN3Q9BWM7 321 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 K7EM74 188 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 F2RL2O00254 374 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 TM4SF5O14894 197 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 LOXL3P58215 753 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 FAM90A2PQ658T7 463 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 ADAM5Q6NVV9 412 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 FAM180AQ6UWF9 173 aa12.89□□□□□ -0.35
BRF1-212ENST00000547562 RPP25LQ8N5L8 163 aaKnown RBP12.89□□□□□ -0.35
BRF1-212ENST00000547562 CEP250Q9BV73 2442 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 C5orf52A6NGY3 159 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 ZNF98A6NK75 572 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 ZNF727A8MUV8 499 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 ATXN7O15265 892 aaPredicted RBP12.88□□□□□ -0.35
BRF1-212ENST00000547562 FCGR3BO75015 233 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 S100A6P06703 90 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 EDDM3BP56851 147 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 MRGPRGQ86SM5 289 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 HPRT1P00492 218 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 FGF7P21781 194 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms