RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 OR4X2Q8NGF9 303 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 OR10D3Q8NH80 312 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 CLDND2Q8NHS1 167 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 SMCR5Q8TEV8 140 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 FGF13Q92913 245 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 SLC35G5Q96KT7 338 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 MIEN1Q9BRT3 115 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 TIMM21Q9BVV7 248 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 MROQ9BYG7 248 aa0.82□□□□□ -2.28
CCDC38-204ENST00000546816 CHMP4BQ9H444 224 aaKnown RBP0.82□□□□□ -2.28
CCDC38-204ENST00000546816 PUS1Q9Y606 427 aaKnown RBP eCLIP0.82□□□□□ -2.28
CCDC38-204ENST00000546816 FN1P02751 2386 aaKnown RBP0.81□□□□□ -2.28
CCDC38-204ENST00000546816 TRAV8-1A0A0A6YYK1 113 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 A0A1W2PQD3 144 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 M0R381 172 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 AZIN1O14977 448 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 CXCL2P19875 107 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 CLDN12P56749 244 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 RBM11P57052 281 aaKnown RBP0.81□□□□□ -2.28
CCDC38-204ENST00000546816 HPCAP84074 193 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 FABP5Q01469 135 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 LGALS9BQ3B8N2 356 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 DNAL1Q4LDG9 190 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 TMEM31Q5JXX7 168 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 SDHAF4Q5VUM1 108 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 DNM1P34Q6PK57 102 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 DRAM2Q6UX65 266 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 C1orf174Q8IYL3 243 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 LHFPL5Q8TAF8 219 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 Q8WTZ3 238 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 RNASE6Q93091 150 aaKnown RBP0.81□□□□□ -2.28
CCDC38-204ENST00000546816 MS4A6EQ96DS6 147 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 ATP6V1G3Q96LB4 118 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 BBS2Q9BXC9 721 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 SLC22A4Q9H015 551 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 SLC2A9Q9NRM0 540 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 BABAM2Q9NXR7 383 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 DOK5Q9P104 306 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 NYNRINQ9P2P1 1898 aaKnown RBP0.81□□□□□ -2.28
CCDC38-204ENST00000546816 THSD7AQ9UPZ6 1657 aa0.81□□□□□ -2.28
CCDC38-204ENST00000546816 DENND4BO75064 1496 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 KDM5BQ9UGL1 1544 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 TRGV2A0A075B6R0 118 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 TRGV5A0A0B4J1U4 118 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 GOLGA6L10A6NI86 522 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 ZNF705FA8MVS1 300 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 J3QQQ9 107 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 STX10O60499 249 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 ATP6V1G2O95670 118 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 MT-CO2P00403 227 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 HIST1H1CP16403 213 aaKnown RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 CXCL3P19876 107 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 CD79BP40259 229 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 HINT1P49773 126 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 IDH3GP51553 393 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 TAS2R30P59541 319 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 KRTAP10-4P60372 401 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 RPL26P61254 145 aaKnown RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 BTN3A2P78410 334 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 MGAT3Q09327 533 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 EBPQ15125 230 aaKnown RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 PABPC1L2AQ5JQF8 200 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 FAM19A5Q7Z5A7 132 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 SPATA12Q7Z6I5 190 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 LHFPL1Q86WI0 220 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 CD302Q8IX05 232 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 LRRC34Q8IZ02 419 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 RPS4Y2Q8TD47 263 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 SLC37A2Q8TED4 501 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 CYGBQ8WWM9 190 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 HSPB9Q9BQS6 159 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 NSRP1Q9H0G5 558 aaKnown RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 MS4A6AQ9H2W1 248 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 EMC3Q9P0I2 261 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 RPL26L1Q9UNX3 145 aaKnown RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 HDGFL3Q9Y3E1 203 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 PCYT1BQ9Y5K3 369 aaPredicted RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 GMEB1Q9Y692 573 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 ZNF532Q9HCE3 1301 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 A0A1W2PP64 1363 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 CHD2O14647 1828 aaKnown RBP0.8□□□□□ -2.28
CCDC38-204ENST00000546816 SLX4Q8IY92 1834 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 RGS12O14924 1447 aa0.8□□□□□ -2.28
CCDC38-204ENST00000546816 SDK1Q7Z5N4 2213 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 TEX50A0A1B0GTY4 177 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 OR6C6A6NF89 314 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 FABP12A6NFH5 140 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 UBE2L6O14933 153 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 ATP8B1O43520 1251 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 CALUO43852 315 aaPredicted RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 HPGDSO60760 199 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 NPYP01303 97 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 UCHL1P09936 223 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 PET100P0DJ07 73 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 RPL14P50914 215 aaKnown RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 RAP1GDS1P52306 607 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 TMEM33P57088 247 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 RPS24P62847 133 aaKnown RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 RELAQ04206 551 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 GNA13Q14344 377 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms