RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PGA5P0DJD9 388 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 MYF5P13349 255 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 KIR2DS2P43631 304 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ASCL1P50553 236 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 CLDN18P56856 261 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TMPRSS3P57727 454 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 RPL23P62829 140 aaKnown RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TGFBR3Q03167 851 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TMEM267Q0VDI3 215 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ADIRFQ15847 76 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TBC1D28Q2M2D7 210 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF585BQ52M93 769 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 C9orf152Q5JTZ5 239 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 SPANXN5Q5MJ07 72 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 SLC23A3Q6PIS1 610 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 C16orf82Q7Z2V1 217 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TIPARPQ7Z3E1 657 aaKnown RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 P4HA3Q7Z4N8 544 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 HAPLN4Q86UW8 402 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 RPP25LQ8N5L8 163 aaKnown RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 DRAM1Q8N682 238 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 OR2M7Q8NG81 312 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 OR10G9Q8NGN4 311 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 OR10G7Q8NGN6 311 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ABHD3Q8WU67 409 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 GALMQ96C23 342 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 CYYR1Q96J86 154 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 LURAP1Q96LR2 239 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 FGF23Q9GZV9 251 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 RBKSQ9H477 322 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 NCOR1P1Q9H4R4 102 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF703Q9H7S9 590 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-225ENST00000545920 OR6C3Q9NZP0 311 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 TRAPPC2LQ9UL33 140 aa5.44□□□□□ -1.54
SNHG1-225ENST00000545920 SPAG17Q6Q759 2223 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 XKRY2A2RUG3 117 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 IQCF6A8MYZ5 107 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SLC33A1O00400 549 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 ITGB1BP1O14713 200 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SYNGR1O43759 233 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 OR2H2O95918 312 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 IGLV2-14P01704 120 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 CRYABP02511 175 aaKnown RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 GYPAP02724 150 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 GZMBP10144 247 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 RAB4AP20338 218 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 ACP1P24666 158 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 OPRK1P41145 380 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 IDH3GP51553 393 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SPCS3P61009 180 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 UBE2NP61088 152 aaKnown RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 PPP1CBP62140 327 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 RANP62826 216 aaKnown RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 PAFAH1B2P68402 229 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 HTD2P86397 168 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 ARL16Q0P5N6 197 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 EIF4EBP1Q13541 118 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 GAMTQ14353 236 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SLC10A1Q14973 349 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 TMEM30BQ3MIR4 351 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 ABHD17BQ5VST6 288 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 Q6ZRM9 215 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 FAM90A1Q86YD7 464 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 OR1K1Q8NGR3 316 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 DTD1Q8TEA8 209 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 RDH5Q92781 318 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 CORO2AQ92828 525 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 BCL2L2Q92843 193 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SNX22Q96L94 193 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SFXN3Q9BWM7 321 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 PRRG4Q9BZD6 226 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 PARLQ9H300 379 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 ZNF552Q9H707 407 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 HES4Q9HCC6 221 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 KCNS2Q9ULS6 477 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 GAB2Q9UQC2 676 aa5.43□□□□□ -1.54
SNHG1-225ENST00000545920 KLF13Q9Y2Y9 288 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 TNRC6BQ9UPQ9 1833 aaKnown RBP5.43□□□□□ -1.54
SNHG1-225ENST00000545920 SHANK1Q9Y566 2161 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 UNC13CQ8NB66 2214 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 UBE2L5PA0A1B0GUS4 154 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 MED19A0JLT2 244 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-225ENST00000545920 PMS2P5A8MQ11 134 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 HS3ST1O14792 307 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 TNFSF12O43508 249 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 WDR1O75083 606 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 RFPL3SP0C7P2 107 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 ESDP10768 282 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 IAPPP10997 89 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 CD1BP29016 333 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 CDC34P49427 236 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-225ENST00000545920 TNFSF10P50591 281 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 CNN1P51911 297 aaKnown RBP5.42□□□□□ -1.54
SNHG1-225ENST00000545920 YPEL3P61236 119 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-225ENST00000545920 COL10A1Q03692 680 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 OR1C1Q15619 314 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 RTL8BQ17RB0 113 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 FFAR4Q5NUL3 377 aa5.42□□□□□ -1.54
SNHG1-225ENST00000545920 FBXW9Q5XUX1 488 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms