RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 TMEM53Q6P2H8 277 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 FBXW12Q6X9E4 464 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CCDC121Q6ZUS5 278 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 SLC16A14Q7RTX9 510 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CLECL1Q8IZS7 167 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 C10orf111Q8N326 155 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 ANKFN1Q8N957 763 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 OR8G5Q8NG78 346 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 OR2Z1Q8NG97 314 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 OR8J2Q8NGG1 315 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 OR6N1Q8NGY5 312 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 OR13G1Q8NGZ3 307 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 AKR7LQ8NHP1 331 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CLHC1Q8NHS4 586 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 CDC26Q8NHZ8 85 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 SLC38A4Q969I6 547 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 OR2H1Q9GZK4 316 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 METTL8Q9H825 291 aaKnown RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 RRAGDQ9NQL2 400 aaPredicted RBP1.84□□□□□ -2.11
SNHG1-224ENST00000545688 TAS2R5Q9NYW4 299 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 TMEM216Q9P0N5 145 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DUX4Q9UBX2 424 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 ZNF391Q9UJN7 358 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 LAMP5Q9UJQ1 280 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 STARD10Q9Y365 291 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 DNAJC15Q9Y5T4 150 aa1.84□□□□□ -2.11
SNHG1-224ENST00000545688 VPS13BQ7Z7G8 4022 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 A0A0B4J2E0 115 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 IGKV2-24A0A0C4DH68 120 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 A0A1B0GX12 115 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 OR6C6A6NF89 314 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ZNF726A6NNF4 738 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 F5H5P2 479 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 FARS2O95363 451 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CLIC3O95833 236 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 PAHP00439 452 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SERPINE1P05121 402 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 BCHEP06276 602 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 DBIP07108 87 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CST2P09228 141 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ASAH2BP0C7U1 165 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 NEFHP12036 1026 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 NCF2P19878 526 aaPredicted RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 PRPS1L1P21108 318 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CCNOP22674 350 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CNTFRP26992 372 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 GTF2E2P29084 291 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ATP6V1E1P36543 226 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 NPBWR2P48146 333 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SRP9P49458 86 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 GDI2P50395 445 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 RAB13P51153 203 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SUB1P53999 127 aaKnown RBP eCLIP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CLDN8P56748 225 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 DNAJB13P59910 316 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 NAA20P61599 178 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 RPL23AP62750 156 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ELF3P78545 371 aaPredicted RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ENDOGQ14249 297 aaKnown RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CASP8Q14790 479 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 KCNJ8Q15842 424 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 TNFAIP8L2Q6P589 184 aaPredicted RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ARL9Q6T311 187 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 LINC00322Q6ZN03 302 aaPredicted RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ZCCHC23Q6ZST2 131 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CCDC80Q76M96 950 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 OR2W3Q7Z3T1 314 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CTAGE3PQ8IX95 158 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 KRTCAP2Q8N6L1 136 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 C19orf18Q8NEA5 215 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SLC26A10Q8NG04 563 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 OR10AD1Q8NGE0 317 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 OR5AK3PQ8NH89 298 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 OR5K1Q8NHB7 308 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 MALSU1Q96EH3 234 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 CHMP6Q96FZ7 201 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SLC35G5Q96KT7 338 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 TMEM43Q9BTV4 400 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ZNF426Q9BUY5 554 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 BCL2L10Q9HD36 194 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ISYNA1Q9NPH2 558 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 ZNF230Q9UIE0 474 aaPredicted RBP1.83□□□□□ -2.12
SNHG1-224ENST00000545688 PSG8Q9UQ74 426 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SNX24Q9Y343 169 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 TIMM10BQ9Y5J6 103 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 U3KQV3 271 aa1.83□□□□□ -2.12
SNHG1-224ENST00000545688 SRRM2Q9UQ35 2752 aaKnown RBP1.82□□□□□ -2.12
SNHG1-224ENST00000545688 TRAV38-1A0A0B4J264 116 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 EXOC1LA0A1B0GW35 172 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 A0A1B0GWA3 101 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 A0A1W2PRD5 423 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 A0A1W2PRF3 423 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 A0A1W2PRM7 423 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 TRIM64CA6NLI5 447 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 ODF3BA8MYP8 253 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 LRRN3E7EW58 273 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 CCRL2O00421 344 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 POLR3GO15318 223 aaPredicted RBP1.82□□□□□ -2.12
SNHG1-224ENST00000545688 GYPAP02724 150 aa1.82□□□□□ -2.12
SNHG1-224ENST00000545688 GSTM3P21266 225 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms