RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 BATF3Q9NR55 127 aa6.97□□□□□ -1.29
CHD4-212ENST00000545083 ERVK13-1Q9NX77 482 aa6.97□□□□□ -1.29
CHD4-212ENST00000545083 TECRQ9NZ01 308 aaKnown RBP6.97□□□□□ -1.29
CHD4-212ENST00000545083 STEAP1Q9UHE8 339 aa6.97□□□□□ -1.29
CHD4-212ENST00000545083 TRAV8-7A0A075B6U6 113 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.96□□□□□ -1.3
CHD4-212ENST00000545083 PPP5D1E7EU14 171 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 PDCD6O75340 191 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 SCAF4O95104 1147 aaKnown RBP6.96□□□□□ -1.3
CHD4-212ENST00000545083 GLAP06280 429 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 CD2P06729 351 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 MGMTP16455 207 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 IGFBP3P17936 291 aaPredicted RBP6.96□□□□□ -1.3
CHD4-212ENST00000545083 FASP25445 335 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 GBX2P52951 348 aaPredicted RBP6.96□□□□□ -1.3
CHD4-212ENST00000545083 NANOS2P60321 138 aaKnown RBP6.96□□□□□ -1.3
CHD4-212ENST00000545083 RHOGP84095 191 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 GPR176Q14439 515 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 DMRTA1Q5VZB9 504 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 AMIGO2Q86SJ2 522 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 ZDHHC13Q8IUH4 622 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 GPR148Q8TDV2 347 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 RNF183Q96D59 192 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 SULT4A1Q9BR01 284 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 OR1A1Q9P1Q5 309 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 MLXQ9UH92 298 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 PFDN2Q9UHV9 154 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 POMPQ9Y244 141 aa6.96□□□□□ -1.3
CHD4-212ENST00000545083 TRBV9A0A0B4J1U6 114 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 TMEM213A2RRL7 107 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 FAM90A7PA6NKC0 464 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 OR2C1O95371 312 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 ATP6V1G2O95670 118 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 CTRB1P17538 263 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 CBLN1P23435 193 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 SNRPGP62308 76 aaKnown RBP6.95□□□□□ -1.3
CHD4-212ENST00000545083 MRPL28Q13084 256 aaKnown RBP6.95□□□□□ -1.3
CHD4-212ENST00000545083 SLC25A30Q5SVS4 291 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 ZNF57Q68EA5 555 aaPredicted RBP6.95□□□□□ -1.3
CHD4-212ENST00000545083 CTRB2Q6GPI1 263 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 LINC00336Q6ZUF6 198 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 SVOPQ8N4V2 548 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 TRUB1Q8WWH5 349 aaKnown RBP6.95□□□□□ -1.3
CHD4-212ENST00000545083 FAM46BQ96A09 425 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 C11orf54Q9H0W9 315 aaPredicted RBP6.95□□□□□ -1.3
CHD4-212ENST00000545083 IMPAD1Q9NX62 359 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 LRRC42Q9Y546 428 aa6.95□□□□□ -1.3
CHD4-212ENST00000545083 FAM223BA6NKX1 122 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 SRRM4A7MD48 611 aaKnown RBP6.94□□□□□ -1.3
CHD4-212ENST00000545083 LGALS9O00182 355 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 ITGB1BP1O14713 200 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 XRCC3O43542 346 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 CRTAPO75718 401 aaPredicted RBP6.94□□□□□ -1.3
CHD4-212ENST00000545083 OR9G9P0C7N8 305 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 APOC4P55056 127 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 ATP5G2Q06055 141 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 AWAT2Q6E213 333 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 ZNF880Q6PDB4 577 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 PDPNQ86YL7 162 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 FAM223AQ8IWN6 122 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 JAGN1Q8N5M9 183 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 TMEM217Q8N7C4 229 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 UXS1Q8NBZ7 420 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 THRSPQ92748 146 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 MRPL48Q96GC5 212 aaKnown RBP6.94□□□□□ -1.3
CHD4-212ENST00000545083 FAAP24Q9BTP7 215 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 AMBNQ9NP70 447 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 ABRACLQ9P1F3 81 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 FBXL17Q9UF56 701 aa6.94□□□□□ -1.3
CHD4-212ENST00000545083 TRBV5-5A0A0J9YX44 114 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 UBE2CO00762 179 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 GGCTO75223 188 aaKnown RBP6.93□□□□□ -1.3
CHD4-212ENST00000545083 TUSC2O75896 110 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 APOA2P02652 100 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 LIMS3P0CW19 117 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 LIMS4P0CW20 117 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 GABRB1P18505 474 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 FCGR2BP31994 310 aaPredicted RBP6.93□□□□□ -1.3
CHD4-212ENST00000545083 MEDAGQ5VYS4 303 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 RPL22L1Q6P5R6 122 aaKnown RBP6.93□□□□□ -1.3
CHD4-212ENST00000545083 BTNL8Q6UX41 500 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 C19orf35Q6ZS72 473 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 C6orf201Q7Z4U5 140 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 PHB2Q99623 299 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 SLC35D1Q9NTN3 355 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 UBQLN2Q9UHD9 624 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 APLNQ9ULZ1 77 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 OAZ3Q9UMX2 235 aa6.93□□□□□ -1.3
CHD4-212ENST00000545083 A0A1W2PPK0 400 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 A8MWP6 167 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 M0R1X1 148 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 RTL8CO15255 209 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 OR2J3O76001 311 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 S1PR2O95136 353 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 NAPSAO96009 420 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 RPL35AP18077 110 aaKnown RBP6.92□□□□□ -1.3
CHD4-212ENST00000545083 CAPGP40121 348 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 CEACAM6P40199 344 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms