RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 STRAPQ9Y3F4 350 aaKnown RBP13.75□□□□□ -0.21
CHFR-224ENST00000545046 YLPM1P49750 1951 aaKnown RBP13.75□□□□□ -0.21
CHFR-224ENST00000545046 PRH1P02810 166 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 NFYBP25208 207 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 ID4P47928 161 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 CAMLGP49069 296 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 ADORA2A-AS1P86434 159 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 TMEM267Q0VDI3 215 aaPredicted RBP13.75□□□□□ -0.21
CHFR-224ENST00000545046 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 CA5BP1Q8WTZ4 195 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 IFI27L2Q9H2X8 130 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 CISD1Q9NZ45 108 aaKnown RBP13.75□□□□□ -0.21
CHFR-224ENST00000545046 HSPB7Q9UBY9 170 aa13.75□□□□□ -0.21
CHFR-224ENST00000545046 FCGR3BO75015 233 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 PROP1O75360 226 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 HPRT1P00492 218 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 ATP6V0CP27449 155 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 MIDNQ504T8 468 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 R3HDM4Q96D70 268 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 GNPNAT1Q96EK6 184 aaPredicted RBP13.74□□□□□ -0.21
CHFR-224ENST00000545046 RBKSQ9H477 322 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 PRORYQ9H606 182 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 CACFD1Q9UGQ2 172 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 LINC00312Q9Y6C7 94 aa13.74□□□□□ -0.21
CHFR-224ENST00000545046 SLC31A2O15432 143 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 PLAUP00749 431 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 IFNA5P01569 189 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 APOC3P02656 99 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 GRNP28799 593 aaKnown RBP13.73□□□□□ -0.21
CHFR-224ENST00000545046 KIR2DS2P43631 304 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
CHFR-224ENST00000545046 CT45A1Q5HYN5 189 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 TMEM182Q6ZP80 229 aaPredicted RBP13.73□□□□□ -0.21
CHFR-224ENST00000545046 TCF23Q7RTU1 214 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.73□□□□□ -0.21
CHFR-224ENST00000545046 OR2G3Q8NGZ4 309 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 CT45A3Q8NHU0 189 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 LEAP2Q969E1 77 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 LINC00574Q9H8X3 128 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 TREM1Q9NP99 234 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 MARCH11A6NNE9 402 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 RBMXL2O75526 392 aaKnown RBP13.73□□□□□ -0.21
CHFR-224ENST00000545046 AKR1C1Q04828 323 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 S1PR3Q99500 378 aa13.73□□□□□ -0.21
CHFR-224ENST00000545046 TMEM218A2RU14 115 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 TRIM77I1YAP6 450 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 TSPAN15O95858 294 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 HBG1P69891 147 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 HBG2P69892 147 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 ZNF616Q08AN1 781 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 LY6DQ14210 128 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 SPANXN5Q5MJ07 72 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 SLC25A24Q6NUK1 477 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 GAL3ST2Q9H3Q3 398 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 C19orf12Q9NSK7 152 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 HCFC1P51610 2035 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 A0A1W2PPE3 182 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 UMAD1C9J7I0 102 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 RBFOX2O43251 390 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHFR-224ENST00000545046 NDUFB3O43676 98 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 METTL15P1P0C7V9 234 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 RPL31P62899 125 aaKnown RBP13.72□□□□□ -0.21
CHFR-224ENST00000545046 LYPD6BQ8NI32 183 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 TSNAXQ99598 290 aaKnown RBP13.72□□□□□ -0.21
CHFR-224ENST00000545046 ROS1P08922 2347 aa13.72□□□□□ -0.21
CHFR-224ENST00000545046 IGHV1-69-2A0A0G2JMI3 117 aa13.71□□□□□ -0.21
CHFR-224ENST00000545046 LRRC10Q5BKY1 277 aa13.71□□□□□ -0.21
CHFR-224ENST00000545046 OR10A7Q8NGE5 316 aa13.71□□□□□ -0.21
CHFR-224ENST00000545046 RPUSD1Q9UJJ7 312 aaKnown RBP13.71□□□□□ -0.21
CHFR-224ENST00000545046 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.21
CHFR-224ENST00000545046 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.21
CHFR-224ENST00000545046 GNG10P50151 68 aa13.71□□□□□ -0.22
CHFR-224ENST00000545046 ERVK-16P61578 105 aa13.71□□□□□ -0.22
CHFR-224ENST00000545046 MRPS11P82912 194 aaKnown RBP13.71□□□□□ -0.22
CHFR-224ENST00000545046 SRSF3P84103 164 aaKnown RBP13.71□□□□□ -0.22
CHFR-224ENST00000545046 PRAMEF5Q5TYX0 476 aa13.71□□□□□ -0.22
CHFR-224ENST00000545046 LYG1Q8N1E2 194 aa13.71□□□□□ -0.22
CHFR-224ENST00000545046 MUC15Q8N387 334 aa13.71□□□□□ -0.22
CHFR-224ENST00000545046 ZNF439Q8NDP4 499 aa13.71□□□□□ -0.22
CHFR-224ENST00000545046 SPTA1P02549 2419 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 SAA2-SAA4A0A096LPE2 208 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 FAM90A9PA6NNJ1 464 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 TNFRSF13BO14836 293 aaPredicted RBP13.7□□□□□ -0.22
CHFR-224ENST00000545046 AGPAT2O15120 278 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 SAA2P0DJI9 122 aaPredicted RBP13.7□□□□□ -0.22
CHFR-224ENST00000545046 THBS3P49746 956 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 ARHGDIBP52566 201 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 DEFA5Q01523 94 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 UTF1Q5T230 341 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 LILRB2Q8N423 598 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 COMMD1Q8N668 190 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 FAM213BQ8TBF2 198 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 SCGB1C1Q8TD33 95 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 ADTRPQ96IZ2 230 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 CIB3Q96Q77 187 aaPredicted RBP13.7□□□□□ -0.22
CHFR-224ENST00000545046 TMEM231Q9H6L2 316 aa13.7□□□□□ -0.22
CHFR-224ENST00000545046 C1QL1O75973 258 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 NQO2P16083 231 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 M6PRP20645 277 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms