RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
CCDC78-216ENST00000544996 OR2W1Q9Y3N9 320 aa12.35□□□□□ -0.43
CCDC78-216ENST00000544996 ATP6V0E1O15342 81 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 IGHG4P01861 327 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 SMIM18P0DKX4 95 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 RRASP10301 218 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 NFYAP23511 347 aaPredicted RBP12.34□□□□□ -0.43
CCDC78-216ENST00000544996 LGALS7P47929 136 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 CFHR3Q02985 330 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 PSG5Q15238 335 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 TMEM69Q5SWH9 247 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 ZNF695Q8IW36 515 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 RNF152Q8N8N0 203 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 KLHL30-AS1Q8NEE0 82 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 WFDC9Q8NEX5 89 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 MRPS26Q9BYN8 205 aaKnown RBP12.34□□□□□ -0.43
CCDC78-216ENST00000544996 WSB1Q9Y6I7 421 aa12.34□□□□□ -0.43
CCDC78-216ENST00000544996 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 TRAV41A0A0B4J266 112 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 G3V4G9 280 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 J3QRK9 145 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 HLA-DQB1P01920 261 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
CCDC78-216ENST00000544996 CX3CL1P78423 397 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 TMEM267Q0VDI3 215 aaPredicted RBP12.33□□□□□ -0.44
CCDC78-216ENST00000544996 SAMD5Q5TGI4 173 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 TMEM65Q6PI78 240 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 HOGA1Q86XE5 327 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 ZNF645Q8N7E2 425 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 GVQW1Q8N7I0 195 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 ABHD5Q8WTS1 349 aa12.33□□□□□ -0.44
CCDC78-216ENST00000544996 SMIM31A0A1B0GVY4 71 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 G3V318 75 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 FCN1O00602 326 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 SHOXO15266 292 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 SLC25A17O43808 307 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 DUTP33316 252 aaKnown RBP12.32□□□□□ -0.44
CCDC78-216ENST00000544996 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
CCDC78-216ENST00000544996 RORCP51449 518 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 C8orf86Q6ZUL3 223 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 ANKRD13BQ86YJ7 626 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 BVESQ8NE79 360 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 ACOT12Q8WYK0 555 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 C5orf30Q96GV9 206 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 CLCC1Q96S66 551 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 IFT46Q9NQC8 304 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 COMMD3Q9UBI1 195 aa12.32□□□□□ -0.44
CCDC78-216ENST00000544996 TUSC2O75896 110 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 GABARAPO95166 117 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 PTHLHP12272 177 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 PSMB8P28062 276 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 PPIFP30405 207 aaKnown RBP12.31□□□□□ -0.44
CCDC78-216ENST00000544996 MYCNOSP40205 109 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 ECSCRQ19T08 205 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 OXLD1Q5BKU9 147 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 GPR107Q5VW38 600 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 LCNL1Q6ZST4 164 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 C18orf65Q6ZTR6 163 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 GPR141Q7Z602 305 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 TCTEX1D1Q8N7M0 179 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 PRELID3BQ9Y3B1 194 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 A3GALT2U3KPV4 340 aa12.31□□□□□ -0.44
CCDC78-216ENST00000544996 DUS4LO95620 317 aaKnown RBP12.3□□□□□ -0.44
CCDC78-216ENST00000544996 CA2P00918 260 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 IGLV1-40P01703 118 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 APOA1P02647 267 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 FCER2P06734 321 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 FCGR2CP31995 323 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
CCDC78-216ENST00000544996 TAS2R20P59543 309 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 NDPQ00604 133 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 CTF1Q16619 201 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 BEAN1Q3B7T3 259 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 MZT2AQ6P582 158 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 PPP1R27Q86WC6 154 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 MRPL41Q8IXM3 137 aaKnown RBP12.3□□□□□ -0.44
CCDC78-216ENST00000544996 MINDY2Q8NBR6 621 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 DDB2Q92466 427 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 AP3S1Q92572 193 aa12.3□□□□□ -0.44
CCDC78-216ENST00000544996 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
CCDC78-216ENST00000544996 MRPS7Q9Y2R9 242 aaKnown RBP12.3□□□□□ -0.44
CCDC78-216ENST00000544996 RBMX2Q9Y388 322 aaKnown RBP12.3□□□□□ -0.44
CCDC78-216ENST00000544996 IGKV1D-13A0A0B4J2D9 117 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 A0A1W2PN81 502 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 MEIS3P1A6NDR6 274 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 LINC00473A8K010 186 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 CCL24O00175 119 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 WIPF1O43516 503 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 CNIH1O95406 144 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 CRYZL1O95825 349 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 IGLV2-23P01705 113 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 IGKV1-13P0DP09 117 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 IGLL1P15814 213 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 CD40LGP29965 261 aa12.29□□□□□ -0.44
CCDC78-216ENST00000544996 PRSS3P35030 304 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms