RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 RNF167Q9H6Y7 350 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 PARP11Q9NR21 331 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 SLC35D1Q9NTN3 355 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 SDHAF2Q9NX18 166 aa9.27□□□□□ -0.93
HDAC4-216ENST00000544989 TRAV41A0A0B4J266 112 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 CLEC2LP0C7M8 214 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 CNTFRP26992 372 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 PSMB8P28062 276 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 CD40LGP29965 261 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 LUMP51884 338 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-216ENST00000544989 PSG5Q15238 335 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 C1QL4Q86Z23 238 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 ZNF645Q8N7E2 425 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 DRAXINQ8NBI3 349 aaPredicted RBP9.26□□□□□ -0.93
HDAC4-216ENST00000544989 NUDCD2Q8WVJ2 157 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 SLC25A38Q96DW6 304 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 S100A16Q96FQ6 103 aaKnown RBP9.26□□□□□ -0.93
HDAC4-216ENST00000544989 RITA1Q96K30 269 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 FBXL15Q9H469 300 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 NECAP2Q9NVZ3 263 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 METTL1Q9UBP6 276 aaKnown RBP9.26□□□□□ -0.93
HDAC4-216ENST00000544989 ANXA10Q9UJ72 324 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 OR2W1Q9Y3N9 320 aa9.26□□□□□ -0.93
HDAC4-216ENST00000544989 TRAV18A0A075B6X5 111 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 XRCC3O43542 346 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 PROP1O75360 226 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 HLA-DQB1P01920 261 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 IGKV1-16P04430 117 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 RPLP1P05386 114 aaKnown RBP9.25□□□□□ -0.93
HDAC4-216ENST00000544989 PPIFP30405 207 aaKnown RBP9.25□□□□□ -0.93
HDAC4-216ENST00000544989 ARPC4P59998 168 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 CX3CL1P78423 397 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 AKIRIN2Q53H80 203 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 UBE2NLQ5JXB2 153 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 MRPL41Q8IXM3 137 aaKnown RBP9.25□□□□□ -0.93
HDAC4-216ENST00000544989 LINC00482Q8N8I6 264 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 MINDY2Q8NBR6 621 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 UBE2E2Q96LR5 201 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 TMEM68Q96MH6 324 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 FOXA2Q9Y261 457 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-216ENST00000544989 VSIG4Q9Y279 399 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
HDAC4-216ENST00000544989 CCL24O00175 119 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 SHOXO15266 292 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 CREBL2O60519 120 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-216ENST00000544989 IGLV1-40P01703 118 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 RPS19P39019 145 aaKnown RBP9.24□□□□□ -0.93
HDAC4-216ENST00000544989 RUNX1Q01196 453 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 MSMO1Q15800 293 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 VMA21Q3ZAQ7 101 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 TMEM177Q53S58 311 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 ETV3LQ6ZN32 361 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 PPP1R27Q86WC6 154 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 BEST4Q8NFU0 473 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 OR5H6Q8NGV6 325 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 OSR1Q8TAX0 266 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-216ENST00000544989 MYOZ3Q8TDC0 251 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 ABHD5Q8WTS1 349 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 ACOT12Q8WYK0 555 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 SLC25A46Q96AG3 418 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 HARBI1Q96MB7 349 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 CMTM3Q96MX0 182 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 P2RX4Q99571 388 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 AUNIPQ9H7T9 357 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 ELF5Q9UKW6 265 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-216ENST00000544989 MRPS7Q9Y2R9 242 aaKnown RBP9.24□□□□□ -0.93
HDAC4-216ENST00000544989 WSB1Q9Y6I7 421 aa9.24□□□□□ -0.93
HDAC4-216ENST00000544989 IGKV1D-8A0A087WSZ0 117 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 G3V318 75 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 SLC25A17O43808 307 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 SSX5O60225 188 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 IGLL1P15814 213 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 DUTP33316 252 aaKnown RBP9.23□□□□□ -0.93
HDAC4-216ENST00000544989 RAB9AP51151 201 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 ECSCRQ19T08 205 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 ACTBL2Q562R1 376 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 LCNL1Q6ZST4 164 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 TEX45Q8NA69 505 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 OR13F1Q8NGS4 319 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 ARPC1AQ92747 370 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 BORCS5Q969J3 196 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 HSD17B10Q99714 261 aaKnown RBP9.23□□□□□ -0.93
HDAC4-216ENST00000544989 FUNDC2Q9BWH2 189 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 SLA2Q9H6Q3 261 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 IFT46Q9NQC8 304 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 NUBP2Q9Y5Y2 271 aa9.23□□□□□ -0.93
HDAC4-216ENST00000544989 SMIM31A0A1B0GVY4 71 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 A0A1W2PN81 502 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 H3BUA1 57 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 FCN1O00602 326 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 ARPC1BO15143 372 aaKnown RBP9.22□□□□□ -0.93
HDAC4-216ENST00000544989 TUSC2O75896 110 aa9.22□□□□□ -0.93
HDAC4-216ENST00000544989 CNIH1O95406 144 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms