RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639		Q6ZSA8	131 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	SPATA24	Q86W54	205 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	C1orf174	Q8IYL3	243 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	OR10D3	Q8NH80	312 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	CLDND2	Q8NHS1	167 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	ZNF563	Q8TA94	476 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	LHFPL5	Q8TAF8	219 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	CYGB	Q8WWM9	190 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	CPNE2	Q96FN4	548 aa	Predicted RBP	1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	CHMP4B	Q9H444	224 aa	Known RBP	1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	RGS12	O14924	1447 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639	COL4A1	P02462	1669 aa		1.29	□□□□□ -2.2
RAP1B-231	ENST00000544639		A0A1B0GVG6	124 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639		M0R381	172 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	AZIN1	O14977	448 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	RAP1GDS1	P52306	607 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	TAS2R30	P59541	319 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	UAP1	Q16222	522 aa	Predicted RBP	1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	LHFPL1	Q86WI0	220 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	DEFB119	Q8N690	84 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	RPS4Y2	Q8TD47	263 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639		Q8WTZ3	238 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	EMC3	Q9P0I2	261 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	CD300A	Q9UGN4	299 aa		1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	DENND4B	O75064	1496 aa	Predicted RBP	1.28	□□□□□ -2.2
RAP1B-231	ENST00000544639	CCDC88C	Q9P219	2028 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	KDM5B	Q9UGL1	1544 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	RIMS2	Q9UQ26	1411 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	TRGV5	A0A0B4J1U4	118 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	TRAV41	A0A0B4J266	112 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	CXCL2	P19875	107 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	RPL14	P50914	215 aa	Known RBP	1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	CLDN12	P56749	244 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	RBM11	P57052	281 aa	Known RBP	1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	ERH	P84090	104 aa	Known RBP	1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	TMED1	Q13445	227 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	SPATA12	Q7Z6I5	190 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	BAP18	Q8IXM2	172 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	LRRC34	Q8IZ02	419 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	DAND5	Q8N907	189 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	OR5J2	Q8NH18	312 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	SMCR5	Q8TEV8	140 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	MS4A6E	Q96DS6	147 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	BBS2	Q9BXC9	721 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	SPACA1	Q9HBV2	294 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	KLK5	Q9Y337	293 aa	Predicted RBP	1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	HDGFL3	Q9Y3E1	203 aa		1.27	□□□□□ -2.21
RAP1B-231	ENST00000544639	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	CUL9	Q8IWT3	2517 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	ZNF532	Q9HCE3	1301 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	TMSB15B	A0A087X1C1	80 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	ZNF705F	A8MVS1	300 aa	Predicted RBP	1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	STX10	O60499	249 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	UCHL1	P09936	223 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	PET100	P0DJ07	73 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	CXCL3	P19876	107 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	CDK9	P50750	372 aa	Known RBP	1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	TMEM33	P57088	247 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	BTN3A2	P78410	334 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	FABP5	Q01469	135 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	RELA	Q04206	551 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	GNA13	Q14344	377 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	LGALS9B	Q3B8N2	356 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	ZNF791	Q3KP31	576 aa	Predicted RBP	1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	SDHAF4	Q5VUM1	108 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	DNM1P34	Q6PK57	102 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	RNASE6	Q93091	150 aa	Known RBP	1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	SFRP2	Q96HF1	295 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	ATP6V1G3	Q96LB4	118 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	NDEL1	Q9GZM8	345 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	SLC22A4	Q9H015	551 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	NSRP1	Q9H0G5	558 aa	Known RBP	1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	WDR54	Q9H977	334 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639	HHLA3	Q9XRX5	114 aa		1.26	□□□□□ -2.21
RAP1B-231	ENST00000544639		A0A1W2PP64	1363 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	TRGV2	A0A075B6R0	118 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	IGKV2-29	A2NJV5	120 aa	Predicted RBP	1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	GOLGA6L10	A6NI86	522 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	RFPL4A	A6NLU0	287 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	RFPL4AL1	F8VTS6	287 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639		M0QX08	132 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	NEMF	O60524	1076 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	MT-CO2	P00403	227 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	NPY	P01303	97 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	CD79B	P40259	229 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	IDH3G	P51553	393 aa	Predicted RBP	1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	GNA12	Q03113	381 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	SLC35E3	Q7Z769	313 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	COA5	Q86WW8	74 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	PACRGL	Q8N7B6	248 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	OR7G1	Q8NGA0	311 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	SLC37A2	Q8TED4	501 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	PACRG	Q96M98	296 aa	Predicted RBP	1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	MS4A6A	Q9H2W1	248 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	DOK5	Q9P104	306 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	PTPRB	P23467	1997 aa		1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	DICER1	Q9UPY3	1922 aa	Known RBP	1.25	□□□□□ -2.21
RAP1B-231	ENST00000544639	FREM1	Q5H8C1	2179 aa		1.24	□□□□□ -2.21
RAP1B-231	ENST00000544639	RAD50	Q92878	1312 aa		1.24	□□□□□ -2.21

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms