RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 MBNL2Q5VZF2 373 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR10P1Q8NGE3 313 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 TAF15Q92804 592 aaKnown RBP eCLIP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 AGMATQ9BSE5 352 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 MAP1LC3BQ9GZQ8 125 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 A8MXE2 369 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CYB5BO43169 146 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CD40P25942 277 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 ADIRFQ15847 76 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR4A16Q8NH70 328 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 LRFN3Q9BTN0 628 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 GCM1Q9NP62 436 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 DMXL1Q9Y485 3027 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 IGHV3-21A0A0B4J1V1 117 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 AHRRA9YTQ3 701 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 PAGE4O60829 102 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 HSPB1P04792 205 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CEACAM1P13688 526 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CD82P27701 267 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CD200P41217 278 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 TLE4Q04727 773 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SPATA31B1PQ5VZV4 182 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 MOB1BQ7L9L4 216 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 IFT22Q9H7X7 185 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 B2MP61769 119 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 S100A12P80511 92 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SRSF7Q16629 238 aaKnown RBP eCLIP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 LSM10Q969L4 123 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 RAB40CQ96S21 281 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 C12orf57Q99622 126 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 MYO10Q9HD67 2058 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 LRRC30A6NM36 301 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 C1QTNF9BB2RNN3 333 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 PRSS44E7EML9 344 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 FCN3O75636 299 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 THBDP07204 575 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR4A8P0C604 315 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 ATP5G3P48201 142 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CT45A1Q5HYN5 189 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 FFAR4Q5NUL3 377 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CT45A3Q8NHU0 189 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 NANPQ8TBE9 248 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 RCC1LQ96I51 464 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SDK1Q7Z5N4 2213 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 A0A0U1RQK1 487 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 FAM90A27PA6NNH2 459 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SRRM5B3KS81 715 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CDSNQ15517 529 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 C17orf58Q2M2W7 97 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 MIC13Q5XKP0 118 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 C15orf54Q8N8G6 183 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR51G1Q8NGK1 321 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR10G4Q8NGN3 311 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR10G9Q8NGN4 311 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR10G7Q8NGN6 311 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 GNPNAT1Q96EK6 184 aaPredicted RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 RNF7Q9UBF6 113 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 CEACAM4O75871 244 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 KITLGP21583 273 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 DUTP33316 252 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 FABP9Q0Z7S8 132 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 EIF2S3LQ2VIR3 472 aaKnown RBP3.11□□□□□ -1.91
BRCA2-206ENST00000544455 C10orf55Q5SWW7 151 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 OR10W1Q8NGF6 305 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 SLC39A9Q9NUM3 307 aa3.11□□□□□ -1.91
BRCA2-206ENST00000544455 TNRC6BQ9UPQ9 1833 aaKnown RBP3.1□□□□□ -1.91
BRCA2-206ENST00000544455 LMO1P25800 156 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 TMEM170AQ8WVE7 144 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 NCKAP5O14513 1909 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 LOC102723971A0A1B0GUV8 181 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 DPRXA6NFQ7 191 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 IFNA4P05014 189 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 LHX4Q969G2 390 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 TUBA4BQ9H853 241 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 HEYLQ9NQ87 328 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-206ENST00000544455 SMCO4Q9NRQ5 59 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-206ENST00000544455 FOXH1O75593 365 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 DFFBO76075 338 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 RAB5AP20339 215 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 NDUFA6P56556 154 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 LOXL3P58215 753 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 PRSS8Q16651 343 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 Q6ZS92 163 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 PMS2P5A8MQ11 134 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 ACTL6BO94805 426 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 OR2C1O95371 312 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 SSBP2P81877 361 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-206ENST00000544455 EIF4EBP1Q13541 118 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-206ENST00000544455 CDPF1Q6NVV7 123 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 SPACA3Q8IXA5 215 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 KDF1Q8NAX2 398 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-206ENST00000544455 WFIKKN1Q96NZ8 548 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 ELOVL1Q9BW60 279 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 MS4A5Q9H3V2 200 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 PCNX3Q9H6A9 2034 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 TMEM140Q9NV12 185 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 ASXL3Q9C0F0 2248 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 TRGV8A0A0C4DH27 118 aa3.1□□□□□ -1.91
BRCA2-206ENST00000544455 CD1BP29016 333 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms