RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 KRASP01116 189 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 MMP9P14780 707 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 G6PCP35575 357 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 GPR157Q5UAW9 335 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 DDB2Q92466 427 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 ZC4H2Q9NQZ6 224 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 COA4Q9NYJ1 87 aa16.26■□□□□ 0.19
COPS7A-218ENST00000543939 SSSCA1O60232 199 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 PVALBP20472 110 aaPredicted RBP16.25■□□□□ 0.19
COPS7A-218ENST00000543939 TMEM33P57088 247 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 CLLU1Q5K131 121 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 OR8B3Q8NGG8 313 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 RAB39BQ96DA2 213 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 NEIL1Q96FI4 390 aaPredicted RBP16.25■□□□□ 0.19
COPS7A-218ENST00000543939 OR8B2Q96RD0 313 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 GSX2Q9BZM3 304 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 KLF2Q9Y5W3 355 aaPredicted RBP16.25■□□□□ 0.19
COPS7A-218ENST00000543939 MALRD1Q5VYJ5 2156 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 ZFYVE26Q68DK2 2539 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 TAAR5O14804 337 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 FCGR3BO75015 233 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 NXPH3O95157 252 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 F12P00748 615 aaPredicted RBP16.25■□□□□ 0.19
COPS7A-218ENST00000543939 KIR2DS2P43631 304 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 C11orf42Q8N5U0 333 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 C8orf31Q8N9H6 132 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 PRELID3BQ9Y3B1 194 aa16.25■□□□□ 0.19
COPS7A-218ENST00000543939 HPRT1P00492 218 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 THBS3P49746 956 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 WDR25Q64LD2 544 aaPredicted RBP16.24■□□□□ 0.19
COPS7A-218ENST00000543939 OR2C3Q8N628 320 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 C8orf46Q8TAG6 207 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 ZNF596Q8TC21 504 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 PHYHIPLQ96FC7 376 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 ADTRPQ96IZ2 230 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 S1PR3Q99500 378 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 ZNRD1Q9P1U0 126 aa16.24■□□□□ 0.19
COPS7A-218ENST00000543939 DOPEY1Q5JWR5 2465 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 A0A087X0M5 115 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 A0A1B0GX30 115 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 WRBO00258 174 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 CHST1O43916 411 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 NDUFS7O75251 213 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 TMEM50AO95807 157 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 VAMP2P63027 116 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 MIDNQ504T8 468 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 BSCL2Q96G97 398 aaPredicted RBP16.23■□□□□ 0.19
COPS7A-218ENST00000543939 FBXL17Q9UF56 701 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 DCHS2Q6V1P9 2916 aa16.23■□□□□ 0.19
COPS7A-218ENST00000543939 OVOL3O00110 214 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 IGHV1-8P0DP01 117 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 TPT1P13693 172 aaKnown RBP16.22■□□□□ 0.19
COPS7A-218ENST00000543939 EFNA4P52798 201 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 PAX9P55771 341 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 RAB14P61106 215 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 LINC00311Q8N616 119 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 ZNF383Q8NA42 475 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 R3HDM4Q96D70 268 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 LYRM2Q9NU23 88 aaPredicted RBP16.22■□□□□ 0.19
COPS7A-218ENST00000543939 FAM24AA6NFZ4 105 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 FAM90A26D6RGX4 464 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 TOR1AO14656 332 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 TLE4Q04727 773 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 ZNF833PQ6ZTB9 187 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 BAP18Q8IXM2 172 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 ZNF295-AS1Q8N0V1 137 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 PCNPQ8WW12 178 aaKnown RBP16.22■□□□□ 0.19
COPS7A-218ENST00000543939 RAB40CQ96S21 281 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 SPOCK3Q9BQ16 436 aa16.22■□□□□ 0.19
COPS7A-218ENST00000543939 PATZ1Q9HBE1 687 aaKnown RBP16.22■□□□□ 0.19
COPS7A-218ENST00000543939 LINC00862A6NCI5 91 aa16.21■□□□□ 0.19
COPS7A-218ENST00000543939 MARCH11A6NNE9 402 aa16.21■□□□□ 0.19
COPS7A-218ENST00000543939 J3QR06 171 aa16.21■□□□□ 0.19
COPS7A-218ENST00000543939 EWSR1Q01844 656 aaKnown RBP eCLIP16.21■□□□□ 0.19
COPS7A-218ENST00000543939 RPL7L1Q6DKI1 246 aaKnown RBP16.21■□□□□ 0.19
COPS7A-218ENST00000543939 CLEC9AQ6UXN8 241 aa16.21■□□□□ 0.19
COPS7A-218ENST00000543939 H2BFWTQ7Z2G1 175 aa16.21■□□□□ 0.19
COPS7A-218ENST00000543939 SESN1Q9Y6P5 492 aa16.21■□□□□ 0.19
COPS7A-218ENST00000543939 IGSF23A1L1A6 192 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 SYNGR2O43760 224 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 GAPDHP04406 335 aaKnown RBP16.2■□□□□ 0.18
COPS7A-218ENST00000543939 CT45A6P0DMU7 189 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 CT45A5P0DMU8 189 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 CT45A7P0DMV0 189 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 CAV2P51636 162 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 NHLH2Q02577 135 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 TMEM252Q8N6L7 170 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 LY6G5BQ8NDX9 201 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 OR4S2Q8NH73 311 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 IGFBPL1Q8WX77 278 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 SMIM3Q9BZL3 60 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 SLC25A31Q9H0C2 315 aa16.2■□□□□ 0.18
COPS7A-218ENST00000543939 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.2■□□□□ 0.18
COPS7A-218ENST00000543939 PPIAL4CA0A0B4J2A2 164 aa16.19■□□□□ 0.18
COPS7A-218ENST00000543939 A0A1W2PPH5 198 aa16.19■□□□□ 0.18
COPS7A-218ENST00000543939 NMBP08949 121 aa16.19■□□□□ 0.18
COPS7A-218ENST00000543939 PPIAL4GP0DN37 164 aa16.19■□□□□ 0.18
COPS7A-218ENST00000543939 GPR6P46095 362 aaPredicted RBP16.19■□□□□ 0.18
COPS7A-218ENST00000543939 OR9G1Q8NH87 305 aa16.19■□□□□ 0.18
COPS7A-218ENST00000543939 TMEM133Q9H2Q1 129 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms