RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 RAET1LQ5VY80 246 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 RASL11AQ6T310 242 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 ANKRD37Q7Z713 158 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 FAM58AQ8N1B3 248 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 LYG1Q8N1E2 194 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OR4P4Q8NGL7 312 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 RDH5Q92781 318 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 ALKBH3Q96Q83 286 aaPredicted RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 LRFN3Q9BTN0 628 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 PLA2G2FQ9BZM2 168 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 TMEM38BQ9NVV0 291 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 C19orf25Q9UFG5 118 aaPredicted RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 WDR83OSQ9Y284 106 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 THADAQ6YHU6 1953 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 CHD3Q12873 2000 aaKnown RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 TMEM265A0A087WTH1 108 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 TRGV10A0A0A0MS01 117 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1-6A0A0C4DH72 117 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 RAB29O14966 203 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 HMGB3O15347 200 aaKnown RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 LINC00869P0C866 280 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 PTGDSP41222 190 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IER3P46695 156 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 MAJINQ3KP22 176 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 TRIM61Q5EBN2 209 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 TCF23Q7RTU1 214 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 C17orf82Q86X59 251 aaPredicted RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 MMD2Q8IY49 270 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 FGFRL1Q8N441 504 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 Q8N976 141 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 WDR31Q8NA23 367 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 SCCPDHQ8NBX0 429 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OR1L3Q8NH93 324 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 C11orf52Q96A22 123 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 RNF208Q9H0X6 261 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 SEPSECSQ9HD40 501 aaKnown RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 NAT8BQ9UHF3 227 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IGLV3-12A0A075B6K2 115 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 A0A1B0GUS0 222 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 A0A1W2PRS3 328 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IGLC7A0M8Q6 106 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 CBY3A6NI87 242 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 LRRC30A6NM36 301 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 C10orf142B7Z368 130 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IFNL4K9M1U5 179 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1-39P01597 117 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 IGKV1D-39P04432 117 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 ZNF32P17041 273 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 BCL3P20749 454 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OPRK1P41145 380 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 LINC00310P59036 64 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 CEACAM21Q3KPI0 293 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 NRN1LQ496H8 165 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 PHYHD1Q5SRE7 291 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 C12orf54Q6X4T0 127 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 ZDHHC23Q8IYP9 409 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OR2M7Q8NG81 312 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OR5A2Q8NGI9 324 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OCC1Q8TAD7 63 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 GATAD1Q8WUU5 269 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 SPACA9Q96E40 222 aaPredicted RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 FAM103A1Q9BTL3 118 aaKnown RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 C1QTNF5Q9BXJ0 243 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 GNB4Q9HAV0 340 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 OSTCQ9NRP0 149 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 KCNS2Q9ULS6 477 aa4.22□□□□□ -1.73
LMO3-229ENST00000543721 NCOA6Q14686 2063 aaPredicted RBP4.22□□□□□ -1.73
LMO3-229ENST00000543721 KIAA2026Q5HYC2 2103 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 RALGAPA1Q6GYQ0 2036 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 LOC105371242A0A075B767 164 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 OR5B21A6NL26 309 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 RBFOX2O43251 390 aaKnown RBP eCLIP4.21□□□□□ -1.73
LMO3-229ENST00000543721 AMY1AP04745 511 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 C3orf79P0CE67 100 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 STAG3L2P0CL84 134 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 STAG3L3P0CL85 134 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 AREGP15514 252 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 ATP5G3P48201 142 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 HINT1P49773 126 aaPredicted RBP4.21□□□□□ -1.73
LMO3-229ENST00000543721 SELENOVP59797 346 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 CX3CL1P78423 397 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 PDCD1Q15116 288 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 ZNF585BQ52M93 769 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 PDLIM3Q53GG5 364 aaPredicted RBP4.21□□□□□ -1.73
LMO3-229ENST00000543721 FAM69BQ5VUD6 431 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 MYPOPQ86VE0 399 aaPredicted RBP4.21□□□□□ -1.73
LMO3-229ENST00000543721 ZIC4Q8N9L1 334 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 SGCZQ96LD1 299 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 OR2H1Q9GZK4 316 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 ST20Q9HBF5 79 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 CLEC1BQ9P126 229 aa4.21□□□□□ -1.73
LMO3-229ENST00000543721 EXPH5Q8NEV8 1989 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 RP1P56715 2156 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 A0A1W2PS18 150 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 PMS2P5A8MQ11 134 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 CDIPTO14735 213 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 DUX1O43812 170 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 IGLV3-19P01714 112 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 IGHV4-34P06331 123 aa4.21□□□□□ -1.74
LMO3-229ENST00000543721 SRD5A2P31213 254 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms