RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MMDQ15546 238 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 RTL8BQ17RB0 113 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 TUSC1Q2TAM9 212 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 KRTAP24-1Q3LI83 254 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 OR2B11Q5JQS5 317 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 VAX1Q5SQQ9 334 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 AADACL3Q5VUY0 350 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 FAAP20Q6NZ36 180 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 DHRS11Q6UWP2 260 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 CCBE1Q6UXH8 406 aaPredicted RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 KCTD9Q7L273 389 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 PDPNQ86YL7 162 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 CMTM1Q8IZ96 169 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 ARRDC1Q8N5I2 433 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 GDPD1Q8N9F7 314 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 POC5Q8NA72 575 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 ZBTB34Q8NCN2 500 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 BVESQ8NE79 360 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 OR4F5Q8NH21 305 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 OR2T6Q8NHC8 308 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 TAF15Q92804 592 aaKnown RBP eCLIP5.06□□□□□ -1.6
LTBR-212ENST00000543542 MOB3AQ96BX8 217 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 FLYWCH2Q96CP2 140 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 RBM14Q96PK6 669 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 HSD17B10Q99714 261 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 PRSS22Q9GZN4 317 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 FXYD6Q9H0Q3 95 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 BEX1Q9HBH7 125 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 ZNF107Q9UII5 783 aaPredicted RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 SCP2D1Q9UJQ7 156 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 GAB2Q9UQC2 676 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 RBMX2Q9Y388 322 aaKnown RBP5.06□□□□□ -1.6
LTBR-212ENST00000543542 NF1P21359 2839 aa5.06□□□□□ -1.6
LTBR-212ENST00000543542 NAV3Q8IVL0 2385 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ANKRD20A5PA0PJZ0 165 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 SH2D7A6NKC9 451 aaPredicted RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 FAM90A9PA6NNJ1 464 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 CENPXA8MT69 81 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 H0YJW9 148 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 HAX1O00165 279 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 GPR31O00270 319 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 SHOXO15266 292 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 NBR2O15453 112 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 CHST1O43916 411 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 RLN1P04808 185 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 HKR1P10072 659 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 DUTP33316 252 aaKnown RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 ETV6P41212 452 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ECI1P42126 302 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 VDAC2P45880 294 aaPredicted RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 LINC00205P59089 165 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 HABP2Q14520 560 aaPredicted RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 ZNF846Q147U1 533 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ZNF79Q15937 498 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 PHLDA2Q53GA4 152 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 C12orf54Q6X4T0 127 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ZNF66Q6ZN08 573 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ZNF818PQ6ZRF7 136 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 Q6ZSV7 163 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 SLC38A6Q8IZM9 456 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 MFSD4AQ8N468 514 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ZNF383Q8NA42 475 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 OR8H1Q8NGG4 311 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 OR4D10Q8NGI6 311 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 OR4C16Q8NGL9 310 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 OR51H1Q8NH63 302 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ZFAND1Q8TCF1 268 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 ABHD5Q8WTS1 349 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 RBMXL1Q96E39 390 aaKnown RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 HARBI1Q96MB7 349 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 CLCC1Q96S66 551 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 TSNAXQ99598 290 aaKnown RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 PRRT1Q99946 306 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 SOSTQ9BQB4 213 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 WDR12Q9GZL7 423 aaKnown RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 SRRQ9GZT4 340 aa5.05□□□□□ -1.6
LTBR-212ENST00000543542 C14orf166Q9Y224 244 aaKnown RBP5.05□□□□□ -1.6
LTBR-212ENST00000543542 LINC00473A8K010 186 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 FGF16O43320 207 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 PROP1O75360 226 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 CRYZL1O95825 349 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 CD74P04233 296 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 VSIG10L2P0DP72 767 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 MDKP21741 143 aaPredicted RBP5.04□□□□□ -1.6
LTBR-212ENST00000543542 CNTFRP26992 372 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 GNRHRP30968 328 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 KIR2DS2P43631 304 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 F2RL1P55085 397 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 BLCAPP62952 87 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 EBI3Q14213 229 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 MSMO1Q15800 293 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 BAK1Q16611 211 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 VMA21Q3ZAQ7 101 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 ZNF660Q6AZW8 331 aaPredicted RBP5.04□□□□□ -1.6
LTBR-212ENST00000543542 IDO2Q6ZQW0 420 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 LINC00299Q6ZSB3 139 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 SPAG16Q8N0X2 631 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 C3orf56Q8N813 242 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 C5orf56Q8N8D9 126 aa5.04□□□□□ -1.6
LTBR-212ENST00000543542 CCDC71LQ8N9Z2 235 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms