RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 ZFP36L1Q07352 338 aaKnown RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 BAXQ07812 192 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 Q0VG73 95 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 ZNF154Q13106 437 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 RAB31Q13636 194 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 BATFQ16520 125 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 ZNF542PQ5EBM4 170 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 WDR74Q6RFH5 385 aaPredicted RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 PAQR9Q6ZVX9 377 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 COX15Q7KZN9 410 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 NEGR1Q7Z3B1 354 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 RBM45Q8IUH3 476 aaKnown RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 SGPP2Q8IWX5 399 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 ZNF679Q8IYX0 411 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 SLC39A11Q8N1S5 342 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 ABHD12Q8N2K0 398 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 ZNF433Q8N7K0 673 aaPredicted RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 OR5A2Q8NGI9 324 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 CLDND2Q8NHS1 167 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 SKA2Q8WVK7 121 aaPredicted RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 TMEM37Q8WXS4 190 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 FAM3CQ92520 227 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 PELI1Q96FA3 418 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 OR10C1Q96KK4 312 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 OR5B12Q96R08 314 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 SPAG8Q99932 426 aaPredicted RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 RARRES2Q99969 163 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 RAB11FIP5Q9BXF6 653 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 OR52D1Q9H346 318 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 RAB9BQ9NP90 201 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 GPR84Q9NQS5 396 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 NPIPA1Q9UND3 350 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 URGCP-MRPS24S4R325 110 aa3.22□□□□□ -1.89
MDM2-229ENST00000543046 COL5A3P25940 1745 aaPredicted RBP3.22□□□□□ -1.89
MDM2-229ENST00000543046 HELZP42694 1942 aaKnown RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 TRAV9-1A0A075B6T8 112 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 TRAV26-1A0A087WT03 109 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 IGHV3-38A0A0C4DH36 116 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 TRBV5-4A0A0C4DH59 114 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 FAM230AA0A1W2PPH8 454 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SHISA7A6NL88 538 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SIRPB1O00241 398 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SLC17A2O00624 439 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 TAX1BP3O14907 124 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 TRAF3IP2O43734 574 aaPredicted RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 NPIPB7O75200 414 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 HYPMO75409 117 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 STK17BO94768 372 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SLC25A14O95258 325 aaPredicted RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 SLC2A10O95528 541 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 HRASP01112 189 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 PRH1P02810 166 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 CD99P14209 185 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 KITLGP21583 273 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 HNRNPA2B1P22626 353 aaKnown RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 TUBG1P23258 451 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 TSPOP30536 169 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 GPR183P32249 361 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 GPR6P46095 362 aaPredicted RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 NPBWR2P48146 333 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 REG1BP48304 166 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 RAB9AP51151 201 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 RAB38P57729 211 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 TAS2R41P59536 307 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 LCN6P62502 163 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 BTN3A2P78410 334 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 PMCHL1Q16048 86 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 ACKR1Q16570 336 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 VAX1Q5SQQ9 334 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SPATA46Q5T0L3 261 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 ZNF684Q5T5D7 378 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 PRAMEF5Q5TYX0 476 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 PRAMEF6Q5VXH4 476 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 RAET1LQ5VY80 246 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 WDR82Q6UXN9 313 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 Q6ZN92 141 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 GTF2H5Q6ZYL4 71 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 COX8CQ7Z4L0 72 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 CDC20BQ86Y33 519 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 PIANPQ8IYJ0 282 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 UBALD2Q8IYN6 164 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SPEM1Q8N4L4 309 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 DEFB125Q8N687 156 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 CSNK1A1LQ8N752 337 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 Q8N976 141 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 ZIC4Q8N9L1 334 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 OR5AU1Q8NGC0 362 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 OR52R1Q8NGF1 315 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 OR2Y1Q8NGV0 311 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 OR2T10Q8NGZ9 312 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 OR8S1Q8NH09 359 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 ZNF563Q8TA94 476 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 MBD3L1Q8WWY6 194 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 MRPL24Q96A35 216 aaKnown RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 FAM3DQ96BQ1 224 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 GNPNAT1Q96EK6 184 aaPredicted RBP3.21□□□□□ -1.9
MDM2-229ENST00000543046 WDR34Q96EX3 536 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 MRAP2Q96G30 205 aa3.21□□□□□ -1.9
MDM2-229ENST00000543046 SDSLQ96GA7 329 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms