RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 CMSS1Q9BQ75 279 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 MRPL57Q9BQC6 102 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM208Q9BTX3 173 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 GABARAPL1Q9H0R8 117 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 LINC00597Q9H2U6 94 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CACYBPQ9HB71 228 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM27Q9HBJ8 222 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 CISHQ9NSE2 258 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM100Q9NV29 134 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 ANXA10Q9UJ72 324 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 NDRG2Q9UN36 371 aaKnown RBP2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 GBF1Q92538 1859 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 DOCK5Q9H7D0 1870 aa2.81□□□□□ -1.96
SFSWAP-211ENST00000542813 TRAV19A0A0A6YYK7 116 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 FAM168BA1KXE4 195 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 PLAC8L1A1L4L8 177 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 LRRN3E7EW58 273 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 M0R233 179 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ARPC5O15511 151 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 FABP7O15540 132 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 MPZL2O60487 215 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 GLSO94925 669 aaPredicted RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 WISP3O95389 354 aaPredicted RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 RAB36O95755 333 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 IFNA17P01571 189 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ORM1P02763 201 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 HLA-DPB1P04440 258 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 CTSLP07711 333 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 NMBP08949 121 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 LIMS3P0CW19 117 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 LIMS4P0CW20 117 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 CAPZBP47756 277 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 RAB5CP51148 216 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 DAPP51397 102 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 CDKN2DP55273 166 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 RHOAP61586 193 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 MADCAM1Q13477 382 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 GINS1Q14691 196 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 HERPUD1Q15011 391 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 FCN2Q15485 313 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 OR8G1Q15617 311 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 SSX1Q16384 188 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 COQ5Q5HYK3 327 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 C9orf129Q5T035 196 aaKnown RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 LYPD2Q6UXB3 125 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 NAA40Q86UY6 237 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 MYPOPQ86VE0 399 aaPredicted RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ANGPTL5Q86XS5 388 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 TGIF2LYQ8IUE0 185 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 MSRB3Q8IXL7 192 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF567Q8N184 647 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 GAPTQ8N292 157 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF283Q8N7M2 679 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 SUMF2Q8NBJ7 301 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 OR5J2Q8NH18 312 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 OR2V1Q8NHB1 315 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 AP3S1Q92572 193 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 OR2M2Q96R28 347 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 PRRT1Q99946 306 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 MARVELD1Q9BSK0 173 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 NMNAT1Q9HAN9 279 aaPredicted RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 RDH14Q9HBH5 336 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 DHCR7Q9UBM7 475 aaKnown RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 BTRCQ9Y297 605 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 TPRKBQ9Y3C4 175 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ORC6Q9Y5N6 252 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 SPTAN1Q13813 2472 aaKnown RBP2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 CITO14578 2027 aa2.8□□□□□ -1.96
SFSWAP-211ENST00000542813 ANK1P16157 1881 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CFAP46Q8IYW2 2715 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TEP1Q99973 2627 aaKnown RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 A0A096LPI6 279 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 IGHV3-74A0A0B4J1X5 117 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 IGKV1-8A0A0C4DH67 115 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 A8MWP6 167 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 C9J4A7 227 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 C5orf67F2Z3F1 127 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 G3V3Q6 166 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 J3QLI3 93 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 M0R129 80 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 MPZL1O95297 269 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 IGLV2-23P01705 113 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 HLA-DQB1P01920 261 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 NBEAP1P0C6P0 100 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 LINC00032P0C843 101 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF35P13682 527 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CXCR1P25024 350 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 PSMB5P28074 263 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 GZMMP51124 257 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CCR6P51684 374 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 AP3S2P59780 193 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 DEFA5Q01523 94 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 FABP9Q0Z7S8 132 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 RBMY1FQ15415 496 aaKnown RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 TMEM183BQ1AE95 376 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 CEACAM21Q3KPI0 293 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 LGALSLQ3ZCW2 172 aaPredicted RBP2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 ORMDL2Q53FV1 153 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 FAM74A1Q5RGS3 127 aa2.79□□□□□ -1.96
SFSWAP-211ENST00000542813 ZNF678Q5SXM1 525 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms