RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 OCEL1Q9H607 264 aa18.61■□□□□ 0.57
HOMER3-205ENST00000542541 MDFIC2A0A1B0GVS7 189 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 APOA2P02652 100 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 PI3P19957 117 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 CD1BP29016 333 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 PIGPP57054 158 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 RND3P61587 244 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 EIF4EBP1Q13541 118 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-205ENST00000542541 KCTD9Q7L273 389 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 ZNF383Q8NA42 475 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 OR5AN1Q8NGI8 311 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 RTBDNQ9BSG5 229 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-205ENST00000542541 C5orf66Q9H5L9 145 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 FAM106CPP0CH98 169 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 THNSL2Q86YJ6 484 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 SIGLECL1Q8N7X8 197 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 ZNF418Q8TF45 676 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-205ENST00000542541 TCTEX1D2Q8WW35 142 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 CFHR4Q92496 578 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 ZNF48Q96MX3 618 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-205ENST00000542541 VSIG4Q9Y279 399 aa18.6■□□□□ 0.57
HOMER3-205ENST00000542541 FN1P02751 2386 aaKnown RBP18.59■□□□□ 0.57
HOMER3-205ENST00000542541 BTBD17A6NE02 478 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 TCRBP04435 133 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 RRASP10301 218 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 RAB13P51153 203 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 CBX3Q13185 183 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 GLDNQ6ZMI3 551 aaPredicted RBP18.59■□□□□ 0.57
HOMER3-205ENST00000542541 SSMEM1Q8WWF3 244 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 CAPSLQ8WWF8 208 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 WASHC3Q9Y3C0 194 aa18.59■□□□□ 0.57
HOMER3-205ENST00000542541 LINC00473A8K010 186 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 H0YJW9 148 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 H7C2Y5 167 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 MPPED1O15442 326 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 RLN1P04808 185 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 IER3P46695 156 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 RTL8BQ17RB0 113 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 OR5R1Q8NH85 324 aa18.58■□□□□ 0.56
HOMER3-205ENST00000542541 IGHV3-72A0A0B4J1Y9 119 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 FAM90A9PA6NNJ1 464 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 KIR2DS2P43631 304 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 LINC00205P59089 165 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 RPL30P62888 115 aaKnown RBP18.57■□□□□ 0.56
HOMER3-205ENST00000542541 C11orf88Q6PI97 169 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 TMED4Q7Z7H5 227 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 TBC1D26Q86UD7 250 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 LURAP1LQ8IV03 231 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 CENPSQ8N2Z9 138 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 TCTEX1D1Q8N7M0 179 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 OR51H1Q8NH63 302 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 CD300LFQ8TDQ1 290 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 DDB2Q92466 427 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 GPHA2Q96T91 129 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 SLC35D1Q9NTN3 355 aa18.57■□□□□ 0.56
HOMER3-205ENST00000542541 LIN7CQ9NUP9 197 aaKnown RBP18.57■□□□□ 0.56
HOMER3-205ENST00000542541 TEX13DA0A0J9YY54 714 aaPredicted RBP18.56■□□□□ 0.56
HOMER3-205ENST00000542541 H3BUX3 64 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 F2RP25116 425 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 TAS2R31P59538 309 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 HES1Q14469 280 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 NRARPQ7Z6K4 114 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 PDPNQ86YL7 162 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 DUSP18Q8NEJ0 188 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 OR2T10Q8NGZ9 312 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 PITPNC1Q9UKF7 332 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 VENTXO95231 258 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 IGKV1D-33P01593 117 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 IGKV1-33P01594 117 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 SNRNP70P08621 437 aaKnown RBP18.56■□□□□ 0.56
HOMER3-205ENST00000542541 DHRS7BQ6IAN0 325 aaPredicted RBP18.56■□□□□ 0.56
HOMER3-205ENST00000542541 SGPP2Q8IWX5 399 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 TMEM86BQ8N661 226 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 NUBP2Q9Y5Y2 271 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 POMT1Q9Y6A1 747 aa18.56■□□□□ 0.56
HOMER3-205ENST00000542541 FCGR3BO75015 233 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 B3GALNT1O75752 331 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 PTTG1O95997 202 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 MOSP00540 346 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 AKR1C4P17516 323 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 EBI3Q14213 229 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 TMEM128Q5BJH2 165 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 PIFOQ8TCI5 191 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 JMJD8Q96S16 334 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 C20orf85Q9H1P6 137 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 NUDT15Q9NV35 164 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 KCNIP3Q9Y2W7 256 aa18.55■□□□□ 0.56
HOMER3-205ENST00000542541 ARPC1BO15143 372 aaKnown RBP18.54■□□□□ 0.56
HOMER3-205ENST00000542541 RBFOX2O43251 390 aaKnown RBP eCLIP18.54■□□□□ 0.56
HOMER3-205ENST00000542541 HOXA3O43365 443 aaPredicted RBP18.54■□□□□ 0.56
HOMER3-205ENST00000542541 IGHV4-59P01825 116 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 CD24P25063 80 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 PLET1Q6UQ28 207 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 SPAG16Q8N0X2 631 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 ADAD2Q8NCV1 583 aaKnown RBP18.54■□□□□ 0.56
HOMER3-205ENST00000542541 OR4C13Q8NGP0 309 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 OR4S2Q8NH73 311 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 FLYWCH2Q96CP2 140 aaKnown RBP18.54■□□□□ 0.56
HOMER3-205ENST00000542541 RNF5Q99942 180 aa18.54■□□□□ 0.56
HOMER3-205ENST00000542541 FAM212BQ9NTI7 297 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms