RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 XRCC2O43543 280 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 EFNA2O43921 213 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 ABHD16AO95870 558 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 ZNF883P0CG24 379 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 TAS2R20P59543 309 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 FOXL1Q12952 345 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 IAH1Q2TAA2 248 aaPredicted RBP9.45□□□□□ -0.9
CDH3-203ENST00000542274 MUC21Q5SSG8 566 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 H1FNTQ75WM6 255 aaPredicted RBP9.45□□□□□ -0.9
CDH3-203ENST00000542274 CDC20BQ86Y33 519 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 MARCH1Q8TCQ1 289 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 RNF125Q96EQ8 232 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 EMC6Q9BV81 110 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 JKAMPQ9P055 326 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 MTFP1Q9UDX5 166 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 SPENQ96T58 3664 aaKnown RBP9.45□□□□□ -0.9
CDH3-203ENST00000542274 ANKRD30BLA7E2S9 258 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 M0R1X1 148 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 KRTDAPP60985 99 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 MEF2CQ06413 473 aaPredicted RBP9.45□□□□□ -0.9
CDH3-203ENST00000542274 SYNPRQ8TBG9 265 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 KLRF1Q9NZS2 232 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 KIAA1456Q9P272 454 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 LOXL2Q9Y4K0 774 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 ZFHX4Q86UP3 3567 aa9.45□□□□□ -0.9
CDH3-203ENST00000542274 TRAV8-7A0A075B6U6 113 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 P2RY10O00398 339 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 RENP00797 406 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 CD3DP04234 171 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 ADRA2CP18825 462 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 ALOX5APP20292 161 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 RND3P61587 244 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 PLP2Q04941 152 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 IL11RAQ14626 422 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 FFAR4Q5NUL3 377 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 ZIC4Q8N9L1 334 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 SUMF1Q8NBK3 374 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 AQP3Q92482 292 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 KCNK15Q9H427 330 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 PATZ1Q9HBE1 687 aaKnown RBP9.44□□□□□ -0.9
CDH3-203ENST00000542274 B9D1Q9UPM9 204 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 B3GALT5Q9Y2C3 310 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 WSB1Q9Y6I7 421 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 LAMA5O15230 3695 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 PLPP3O14495 311 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 ST8SIA3O43173 380 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 SPRY1O43609 319 aaPredicted RBP9.44□□□□□ -0.9
CDH3-203ENST00000542274 JTBO76095 146 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
CDH3-203ENST00000542274 AREGP15514 252 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 RPS18P62269 152 aaKnown RBP9.44□□□□□ -0.9
CDH3-203ENST00000542274 CLEC12BQ2HXU8 276 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 EMC4Q5J8M3 183 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 BVES-AS1Q5T3Y7 98 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 SLC18B1Q6NT16 456 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 DHRS13Q6UX07 377 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 OR10V1Q8NGI7 309 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 OR10G9Q8NGN4 311 aa9.44□□□□□ -0.9
CDH3-203ENST00000542274 COA3Q9Y2R0 106 aaPredicted RBP9.44□□□□□ -0.9
CDH3-203ENST00000542274 PTRH2Q9Y3E5 179 aaKnown RBP9.44□□□□□ -0.9
CDH3-203ENST00000542274 FRYQ5TBA9 3013 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 MEGF11A6BM72 1044 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 ZNF850A8MQ14 1090 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 MS4A18H0YCH9 400 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 FBXO45P0C2W1 286 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 RPL27P61353 136 aaKnown RBP9.43□□□□□ -0.9
CDH3-203ENST00000542274 MS4A18Q3C1V0 323 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 SLC25A53Q5H9E4 307 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
CDH3-203ENST00000542274 PERPQ96FX8 193 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 NMES1Q9C002 83 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 MANBALQ9NQG1 85 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 B4GALT7Q9UBV7 327 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 RNF114Q9Y508 228 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 LIPGQ9Y5X9 500 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 ZNF292O60281 2723 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 A0A1W2PNR3 127 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 A0A1W2PNU3 283 aaPredicted RBP9.43□□□□□ -0.9
CDH3-203ENST00000542274 FAM231BA6NCW3 169 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 F2RL2O00254 374 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 SH2D1BO14796 132 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 NRASP01111 189 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 PTGDSP41222 190 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 RRADP55042 308 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 ELOVL3Q9HB03 270 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 NRN1Q9NPD7 142 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 KLHL13Q9P2N7 655 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 RTTNQ86VV8 2226 aa9.43□□□□□ -0.9
CDH3-203ENST00000542274 IGLV1-36A0A0B4J1U3 117 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 TRAV1-2A0A0B4J238 106 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 LOC101059948A0A1B0GTJ6 334 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 DEGS1O15121 323 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 CD5LO43866 347 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 ARL6IP5O75915 188 aa9.42□□□□□ -0.9
CDH3-203ENST00000542274 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
CDH3-203ENST00000542274 POU3F1Q03052 451 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms