RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 LRRC37A5PQ49AS3 106 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 ZNF585BQ52M93 769 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 ODF3L1Q8IXM7 274 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 TCTEX1D2Q8WW35 142 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 HSD17B10Q99714 261 aaKnown RBP22.67■■□□□ 1.22
CCM2-218ENST00000541586 GAB2Q9UQC2 676 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 WNK2Q9Y3S1 2297 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 A0A1W2PPH5 198 aa22.66■■□□□ 1.22
CCM2-218ENST00000541586 LINC00205P59089 165 aa22.66■■□□□ 1.22
CCM2-218ENST00000541586 FGL1Q08830 312 aa22.66■■□□□ 1.22
CCM2-218ENST00000541586 LYG1Q8N1E2 194 aa22.66■■□□□ 1.22
CCM2-218ENST00000541586 COMMD9Q9P000 198 aa22.66■■□□□ 1.22
CCM2-218ENST00000541586 GSKIPQ9P0R6 139 aa22.66■■□□□ 1.22
CCM2-218ENST00000541586 SAA2-SAA4A0A096LPE2 208 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 LINC00473A8K010 186 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 RAB29O14966 203 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 SAA2P0DJI9 122 aaPredicted RBP22.65■■□□□ 1.22
CCM2-218ENST00000541586 C1orf229Q6ZS94 237 aaPredicted RBP22.65■■□□□ 1.22
CCM2-218ENST00000541586 ZNRD1Q9P1U0 126 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 POLR3KQ9Y2Y1 108 aaPredicted RBP22.65■■□□□ 1.22
CCM2-218ENST00000541586 DUXBA0A1W2PPF3 345 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 M0R1X1 148 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 DUTP33316 252 aaKnown RBP22.65■■□□□ 1.22
CCM2-218ENST00000541586 IL15RAQ13261 267 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 LAMTOR1Q6IAA8 161 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 ZNF436-AS1Q8NC38 126 aaPredicted RBP22.65■■□□□ 1.22
CCM2-218ENST00000541586 BOLA1Q9Y3E2 137 aa22.65■■□□□ 1.22
CCM2-218ENST00000541586 HIVEP1P15822 2718 aa22.64■■□□□ 1.22
CCM2-218ENST00000541586 TRAV20A0A0B4J274 112 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 IGHV2-70DA0A0C4DH43 119 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 ENSAO43768 121 aaKnown RBP22.64■■□□□ 1.21
CCM2-218ENST00000541586 IGKV1-39P01597 117 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 IGKV1D-39P04432 117 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 LIPFP07098 398 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 BRWD1-AS2P59051 145 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 OR2B11Q5JQS5 317 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 C9orf62Q8N4C0 152 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 DRAXINQ8NBI3 349 aaPredicted RBP22.64■■□□□ 1.21
CCM2-218ENST00000541586 ZNF251Q9BRH9 671 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 SESN1Q9Y6P5 492 aa22.64■■□□□ 1.21
CCM2-218ENST00000541586 A0A087X0M5 115 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 A0A1B0GX30 115 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 RAMP3O60896 148 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 FOSL1P15407 271 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 ARF6P62330 175 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 PAX2Q02962 417 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 PLSCR3Q9NRY6 295 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 ONECUT1Q9UBC0 465 aa22.63■■□□□ 1.21
CCM2-218ENST00000541586 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.63■■□□□ 1.212e-7■■■□□ 15.8
CCM2-218ENST00000541586 FXYD6-FXYD2A0A087WZ82 144 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 MPC2O95563 127 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 LY6G6DO95868 133 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 RBP4P02753 201 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 VDAC1P21796 283 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 PSMB6P28072 239 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 SPAG16Q8N0X2 631 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 C8orf31Q8N9H6 132 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 ZBTB8BQ8NAP8 495 aaPredicted RBP22.62■■□□□ 1.21
CCM2-218ENST00000541586 TMEM133Q9H2Q1 129 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 INSIG2Q9Y5U4 225 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 PIGBOS1A0A0B4J2F0 54 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 CD5LO43866 347 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 LPAR6P43657 344 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 DVL1P1P54792 670 aaPredicted RBP22.62■■□□□ 1.21
CCM2-218ENST00000541586 KRTAP1-1Q07627 177 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 NMSQ5H8A3 153 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 NCR3LG1Q68D85 454 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 TCTEX1D1Q8N7M0 179 aa22.62■■□□□ 1.21
CCM2-218ENST00000541586 RPA2P15927 270 aa22.61■■□□□ 1.21
CCM2-218ENST00000541586 C11orf87Q6NUJ2 197 aa22.61■■□□□ 1.21
CCM2-218ENST00000541586 FAM219AQ8IW50 185 aa22.61■■□□□ 1.21
CCM2-218ENST00000541586 ZNF596Q8TC21 504 aa22.61■■□□□ 1.21
CCM2-218ENST00000541586 GSX1Q9H4S2 264 aaPredicted RBP22.61■■□□□ 1.21
CCM2-218ENST00000541586 YAE1D1Q9NRH1 226 aa22.61■■□□□ 1.21
CCM2-218ENST00000541586 FAM212BQ9NTI7 297 aaPredicted RBP22.61■■□□□ 1.21
CCM2-218ENST00000541586 HSPB11Q9Y547 144 aa22.61■■□□□ 1.21
CCM2-218ENST00000541586 J3QR06 171 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 CLEC9AQ6UXN8 241 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 Q71RC1 249 aaPredicted RBP22.6■■□□□ 1.21
CCM2-218ENST00000541586 ABHD12Q8N2K0 398 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 LINC00311Q8N616 119 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 SLC25A4P12235 298 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 ZNF816Q0VGE8 651 aaPredicted RBP22.6■■□□□ 1.21
CCM2-218ENST00000541586 RAB32Q13637 225 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 LGALSLQ3ZCW2 172 aaPredicted RBP22.6■■□□□ 1.21
CCM2-218ENST00000541586 OR9G1Q8NH87 305 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 C7orf69Q9H7B7 122 aa22.6■■□□□ 1.21
CCM2-218ENST00000541586 hCG_1809904A0A1W2PP81 198 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 A0A1W2PPE2 198 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 A0A1W2PR64 198 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 A0A1W2PRV1 198 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 HMSDA8MTL9 139 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 DLX1P56177 255 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 S1PR3Q99500 378 aa22.59■■□□□ 1.21
CCM2-218ENST00000541586 TLN2Q9Y4G6 2542 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 A0A0G2JRQ6 117 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 IGKV1-5P01602 117 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 OR10X1Q8NGY0 326 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 THAP6Q8TBB0 222 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 SPIN2AQ99865 258 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms