RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 TAGLNQ01995 201 aaKnown RBP14.45□□□□□ -0.1
CLIP1-215ENST00000541108 IL15RAQ13261 267 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 HLA-DRB5Q30154 266 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 PRSS57Q6UWY2 283 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 DRAXINQ8NBI3 349 aaPredicted RBP14.45□□□□□ -0.1
CLIP1-215ENST00000541108 LSM10Q969L4 123 aaKnown RBP14.45□□□□□ -0.1
CLIP1-215ENST00000541108 WDR89Q96FK6 387 aaPredicted RBP14.45□□□□□ -0.1
CLIP1-215ENST00000541108 MMP26Q9NRE1 261 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 COMMD9Q9P000 198 aa14.45□□□□□ -0.1
CLIP1-215ENST00000541108 G3V3Q6 166 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 RAMP3O60896 148 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 IGKV1-39P01597 117 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 IGKV1D-39P04432 117 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 LPAR6P43657 344 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 IAH1Q2TAA2 248 aaPredicted RBP14.44□□□□□ -0.1
CLIP1-215ENST00000541108 NMSQ5H8A3 153 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 HIST2H2BCQ6DN03 193 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 PPP1R1CQ8WVI7 109 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 SPIN2AQ99865 258 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 SPIN2BQ9BPZ2 258 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 SIRPDQ9H106 197 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 PLEKHA2Q9HB19 425 aa14.44□□□□□ -0.1
CLIP1-215ENST00000541108 SMLR1H3BR10 107 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 HPRT1P00492 218 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 CT45A6P0DMU7 189 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 CT45A5P0DMU8 189 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 CT45A7P0DMV0 189 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 SLC25A6P12236 298 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 LINC00205P59089 165 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 ZNRD1Q9P1U0 126 aa14.43□□□□□ -0.1
CLIP1-215ENST00000541108 AMMECR1Q9Y4X0 333 aaPredicted RBP14.43□□□□□ -0.1
CLIP1-215ENST00000541108 ASH1LQ9NR48 2969 aaKnown RBP14.43□□□□□ -0.1
CLIP1-215ENST00000541108 BUB1B-PAK6H3BSN5 160 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 SNAPC5O75971 98 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 DVL1P1P54792 670 aaPredicted RBP14.42□□□□□ -0.1
CLIP1-215ENST00000541108 Q5BKY6 102 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 FAM219AQ8IW50 185 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 PNKDQ8N490 385 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 ZNF383Q8NA42 475 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 RRNAD1Q96FB5 475 aaKnown RBP14.42□□□□□ -0.1
CLIP1-215ENST00000541108 SIRT7Q9NRC8 400 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 INSIG2Q9Y5U4 225 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 GCN1Q92616 2671 aaKnown RBP14.42□□□□□ -0.1
CLIP1-215ENST00000541108 FCGR3BO75015 233 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 MMP9P14780 707 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 PSMB6P28072 239 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 VMO1Q7Z5L0 202 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 OR4P4Q8NGL7 312 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 OR4S2Q8NH73 311 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 C1orf159Q96HA4 380 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 PCGF1Q9BSM1 259 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 ZFP57Q9NU63 452 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 GSKIPQ9P0R6 139 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 MED13LQ71F56 2210 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 APCP25054 2843 aa14.42□□□□□ -0.1
CLIP1-215ENST00000541108 ABCA12Q86UK0 2595 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 A0A1B0GU03 582 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 TXNL1O43396 289 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 TOX4O94842 621 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 RRASP10301 218 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 COX7A1P24310 79 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 AKR1C2P52895 323 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 PAX8Q06710 450 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 ZNF816Q0VGE8 651 aaPredicted RBP14.41□□□□□ -0.1
CLIP1-215ENST00000541108 OR2B11Q5JQS5 317 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 DHRS7BQ6IAN0 325 aaPredicted RBP14.41□□□□□ -0.1
CLIP1-215ENST00000541108 TGIF2LXQ8IUE1 241 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 ZBTB8BQ8NAP8 495 aaPredicted RBP14.41□□□□□ -0.1
CLIP1-215ENST00000541108 OR5AN1Q8NGI8 311 aa14.41□□□□□ -0.1
CLIP1-215ENST00000541108 NAV2Q8IVL1 2488 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 A0A096LNT2 108 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 B4DSR2 109 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 MPC2O95563 127 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 DLX1P56177 255 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 LOXL1Q08397 574 aaPredicted RBP14.4□□□□□ -0.1
CLIP1-215ENST00000541108 Q5PR19 223 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 THOC7Q6I9Y2 204 aaKnown RBP14.4□□□□□ -0.1
CLIP1-215ENST00000541108 HCP5Q6MZN7 132 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 OR11H4Q8NGC9 324 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 MMP24Q9Y5R2 645 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 CSMD2Q7Z408 3487 aa14.4□□□□□ -0.1
CLIP1-215ENST00000541108 HMSDA8MTL9 139 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 ODF3BA8MYP8 253 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 LY6LH3BQJ8 138 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 S1PR2O95136 353 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 IGKV1-5P01602 117 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 GAPDHP04406 335 aaKnown RBP14.39□□□□□ -0.11
CLIP1-215ENST00000541108 MSMBP08118 114 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 PET100P0DJ07 73 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 HTR1DP28221 377 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 MC5RP33032 325 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 ARHGDIBP52566 201 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 RTL8BQ17RB0 113 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 C11orf87Q6NUJ2 197 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 RNASE11Q8TAA1 199 aaKnown RBP14.39□□□□□ -0.11
CLIP1-215ENST00000541108 COA4Q9NYJ1 87 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 POLQO75417 2590 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 WNK2Q9Y3S1 2297 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 TRAV14DV4A0A0A6YYC5 116 aa14.39□□□□□ -0.11
CLIP1-215ENST00000541108 MARCH11A6NNE9 402 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms