RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CD74P04233 296 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 BLCAPP62952 87 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 RELBQ01201 579 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 MSMO1Q15800 293 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 ZNF79Q15937 498 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 LPCAT3Q6P1A2 487 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 Q6ZSV7 163 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 Q8N6K4 173 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 ZBTB34Q8NCN2 500 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 OR8H1Q8NGG4 311 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 BORCS5Q969J3 196 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 MOB3AQ96BX8 217 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 RBMXL1Q96E39 390 aaKnown RBP12.37□□□□□ -0.43
DDB1-218ENST00000540784 C5orf30Q96GV9 206 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 RANBP3Q9H6Z4 567 aaPredicted RBP12.37□□□□□ -0.43
DDB1-218ENST00000540784 BEX1Q9HBH7 125 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 ATRQ13535 2644 aa12.37□□□□□ -0.43
DDB1-218ENST00000540784 ANKRD20A5PA0PJZ0 165 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 IGLV2-14P01704 120 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 AKAIN1P0CW23 69 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 DUTP33316 252 aaKnown RBP12.36□□□□□ -0.43
DDB1-218ENST00000540784 ZNF45Q02386 682 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 MEF2DQ14814 521 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 LINC00299Q6ZSB3 139 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 ARRDC1Q8N5I2 433 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 RITA1Q96K30 269 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 HSD17B10Q99714 261 aaKnown RBP12.36□□□□□ -0.43
DDB1-218ENST00000540784 RNF5Q99942 180 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 PLSCR3Q9NRY6 295 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
DDB1-218ENST00000540784 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 DISC1C4P0D8 188 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 FGF16O43320 207 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 RRASP10301 218 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 GNRHRP30968 328 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 F2RL1P55085 397 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 CBX3Q13185 183 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 RTL8BQ17RB0 113 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 ABCA11PQ4W5N1 156 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 C11orf88Q6PI97 169 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 ZNF66Q6ZN08 573 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 PDPNQ86YL7 162 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 BVESQ8NE79 360 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
DDB1-218ENST00000540784 RASL11BQ9BPW5 248 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 PTTG2Q9NZH5 202 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 PRELID3BQ9Y3B1 194 aa12.35□□□□□ -0.43
DDB1-218ENST00000540784 CLPSL1A2RUU4 121 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 LINC00473A8K010 186 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 AMY1AP04745 511 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 AMY2AP04746 511 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 MDKP21741 143 aaPredicted RBP12.34□□□□□ -0.43
DDB1-218ENST00000540784 UCP3P55916 312 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 AP3S2P59780 193 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 RPS16P62249 146 aaKnown RBP12.34□□□□□ -0.43
DDB1-218ENST00000540784 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 ARSJQ5FYB0 599 aaPredicted RBP12.34□□□□□ -0.43
DDB1-218ENST00000540784 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 ZNF818PQ6ZRF7 136 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 CMTM1Q8IZ96 169 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 C5orf56Q8N8D9 126 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 OR2T6Q8NHC8 308 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 TERB2Q8NHR7 220 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 LINC01006Q8NI28 216 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 SRRQ9GZT4 340 aa12.34□□□□□ -0.43
DDB1-218ENST00000540784 TNFSF12O43508 249 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 IGKV1-16P04430 117 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 COMPP49747 757 aaPredicted RBP12.33□□□□□ -0.44
DDB1-218ENST00000540784 RPL30P62888 115 aaKnown RBP12.33□□□□□ -0.44
DDB1-218ENST00000540784 EIF4EBP1Q13541 118 aaPredicted RBP12.33□□□□□ -0.44
DDB1-218ENST00000540784 MMDQ15546 238 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 AWAT1Q58HT5 328 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 AADACL3Q5VUY0 350 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 C12orf54Q6X4T0 127 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 Q6ZS46 218 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 KCTD9Q7L273 389 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 TOMM5Q8N4H5 51 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 Q8N9W7 124 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 NPBQ8NG41 125 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 TCTEX1D2Q8WW35 142 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 DDB2Q92466 427 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 GPHA2Q96T91 129 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 TSNAXQ99598 290 aaKnown RBP12.33□□□□□ -0.44
DDB1-218ENST00000540784 ZNF702PQ9H963 129 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 KIAA1456Q9P272 454 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 SIGLEC9Q9Y336 463 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 RNF114Q9Y508 228 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 MMP24Q9Y5R2 645 aa12.33□□□□□ -0.44
DDB1-218ENST00000540784 SH2D7A6NKC9 451 aaPredicted RBP12.32□□□□□ -0.44
DDB1-218ENST00000540784 GPR31O00270 319 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 NBR2O15453 112 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 FCGR3BO75015 233 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 PEX14O75381 377 aa12.32□□□□□ -0.44
DDB1-218ENST00000540784 PGLYRP1O75594 196 aaPredicted RBP12.32□□□□□ -0.44
DDB1-218ENST00000540784 ZNF735P0CB33 412 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms