RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	NRAS	P01111	189 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OPN1MW	P04001	364 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OPN1MW2	P0DN77	364 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OPN1MW3	P0DN78	364 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DEFA4	P12838	97 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	KIR2DL2	P43627	348 aa	Predicted RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FAM3B	P58499	235 aa	Predicted RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ID3	Q02535	119 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BATF	Q16520	125 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	STARD4	Q96DR4	205 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NOL4L	Q96MY1	436 aa	Predicted RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR51B6	Q9H340	312 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CISD1	Q9NZ45	108 aa	Known RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TAAR3P	Q9P1P4	343 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TRBV24-1	A0A075B6N3	115 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF716	A6NP11	495 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		B4DEV8	164 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		H7BYZ3	331 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGLV3-1	P01715	115 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GALR1	P47211	349 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FAM27E3	Q08E93	113 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CST9LP1	Q5W188	147 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLCXD3	Q63HM9	321 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		Q6ZRM9	215 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM54	Q969K7	222 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SPIN2A	Q99865	258 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SPIN2B	Q9BPZ2	258 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SPOCK3	Q9BQ16	436 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SRD5A3	Q9H8P0	318 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DCAF16	Q9NXF7	216 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	POLDIP2	Q9Y2S7	368 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PDCD6	O75340	191 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF737	O75373	536 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TK1	P04183	234 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PFN1	P07737	140 aa	Known RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF705D	P0CH99	300 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF705B	P0CI00	300 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLA2G2A	P14555	144 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PAX1	P15863	534 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	EGR1	P18146	543 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CHRNA7	P36544	502 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DSCR9	P59020	149 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CD81	P60033	236 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PPP1CB	P62140	327 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HIST3H3	Q16695	136 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MDP1	Q86V88	176 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MKX	Q8IYA7	352 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FAM169B	Q8N8A8	192 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LINC01560	Q8TB33	94 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LHX4	Q969G2	390 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RAB24	Q969Q5	203 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NABP1	Q96AH0	204 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GPR146	Q96CH1	333 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NBAS	A2RRP1	2371 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A1B0GWJ7	208 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MAP1LC3B2	A6NCE7	125 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NUPR1	O60356	82 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MB	P02144	154 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NPS	P0C0P6	89 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	VDAC1	P21796	283 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	APOBEC3A	P31941	199 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM241	Q24JQ0	296 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BSX	Q3C1V8	233 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NMS	Q5H8A3	153 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR8G2P	Q6IF36	304 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM256	Q8N2U0	113 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PRR18	Q8N4B5	295 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NEU4	Q8WWR8	484 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM56	Q96MV1	263 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR5B12	Q96R08	314 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CCL19	Q99731	98 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR2H1	Q9GZK4	316 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	MAP1LC3B	Q9GZQ8	125 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM56-RWDD3	S4R434	201 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CHD3	Q12873	2000 aa	Known RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CHD6	Q8TD26	2715 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FRYL	O94915	3013 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PSG2	P11465	335 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HNF1A	P20823	631 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	UCP3	P55916	312 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF92	Q03936	586 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PNRC1	Q12796	327 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IL24	Q13007	206 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HERPUD1	Q15011	391 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	KCNMB1	Q16558	191 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C3orf36	Q3SXR2	165 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FBXL19-AS1	Q494R0	122 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	LBH	Q53QV2	105 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SPANXN5	Q5MJ07	72 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF295-AS1	Q8N0V1	137 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR8G5	Q8NG78	346 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IL1F10	Q8WWZ1	152 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BCL2L2	Q92843	193 aa	Predicted RBP	4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IL22RA2	Q969J5	263 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SLC25A22	Q9H936	323 aa		4.78	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	VAX2	Q9UIW0	290 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms