RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 PECRQ9BY49 303 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 ZMAT4Q9H898 229 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 RDH8Q9NYR8 311 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 STUB1Q9UNE7 303 aa10.85□□□□□ -0.67
SNHG1-213ENST00000540725 AK6Q9Y3D8 172 aaKnown RBP10.85□□□□□ -0.67
SNHG1-213ENST00000540725 M0R1X1 148 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 CLDN12P56749 244 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 RPS25P62851 125 aaKnown RBP10.84□□□□□ -0.67
SNHG1-213ENST00000540725 TPBGQ13641 420 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.84□□□□□ -0.67
SNHG1-213ENST00000540725 OR56B1Q8NGI3 324 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 RSRP1Q9BUV0 290 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 SLC35D1Q9NTN3 355 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 CSMD3Q7Z407 3707 aa10.84□□□□□ -0.67
SNHG1-213ENST00000540725 C13orf42A0A1B0GVH6 325 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 TRDCB7Z8K6 153 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 H3BUA1 57 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 ARL6IP5O75915 188 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 CNIH1O95406 144 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 HSMCR30P0CW71 290 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 ZP3P21754 424 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
SNHG1-213ENST00000540725 TRAM1Q15629 374 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 PLAC9Q5JTB6 97 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 OR5T1Q8NG75 326 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 FAM3DQ96BQ1 224 aa10.83□□□□□ -0.68
SNHG1-213ENST00000540725 RANGRFQ9HD47 186 aaPredicted RBP10.83□□□□□ -0.68
SNHG1-213ENST00000540725 A0A0G2JLM5 398 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 LYL1P12980 280 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 PSMA1P25786 263 aaKnown RBP10.82□□□□□ -0.68
SNHG1-213ENST00000540725 SERPINB10P48595 397 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 PJVKQ0ZLH3 352 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 ANKRD13BQ86YJ7 626 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 Q8N1Y9 231 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 OR4A4PQ8NGN8 299 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 TM2D3Q9BRN9 247 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 OR2D2Q9H210 308 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
SNHG1-213ENST00000540725 ANKRD34BA5PLL1 514 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 BET1O15155 118 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 FABP7O15540 132 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 DENRO43583 198 aaKnown RBP10.81□□□□□ -0.68
SNHG1-213ENST00000540725 CD3GP09693 182 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 CALRP27797 417 aaKnown RBP10.81□□□□□ -0.68
SNHG1-213ENST00000540725 LGALS7P47929 136 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 MRPS15P82914 257 aaKnown RBP10.81□□□□□ -0.68
SNHG1-213ENST00000540725 PLA2G7Q13093 441 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 C2orf76Q3KRA6 126 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 HARBI1Q96MB7 349 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 CITED4Q96RK1 184 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 LYSTQ99698 3801 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 DUSP21Q9H596 190 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 SDHAF2Q9NX18 166 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 V9GY05 133 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 STARD9Q9P2P6 4700 aa10.81□□□□□ -0.68
SNHG1-213ENST00000540725 TMEM272A0A1B0GTI8 110 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 LDLRAD4O15165 306 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 RGS10O43665 173 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 CRYGBP07316 175 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 FCGR3AP08637 254 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 RANBP1P43487 201 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 FABP5Q01469 135 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 DEFA5Q01523 94 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 MLLT11Q13015 90 aaPredicted RBP10.8□□□□□ -0.68
SNHG1-213ENST00000540725 KLF5Q13887 457 aaPredicted RBP10.8□□□□□ -0.68
SNHG1-213ENST00000540725 MOGAT2Q3SYC2 334 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 IGSF11Q5DX21 431 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 HES5Q5TA89 166 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 SGPP2Q8IWX5 399 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 RAB3CQ96E17 227 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 TMEM68Q96MH6 324 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 CABLES2Q9BTV7 478 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 PALMDQ9NP74 551 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 C19orf73Q9NVV2 129 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 KCNK7Q9Y2U2 307 aa10.8□□□□□ -0.68
SNHG1-213ENST00000540725 TRBV6-7A0A0A0MS04 114 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 A8MZ25 164 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 GSTT2P0CG29 244 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 GSTT2BP0CG30 244 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 AQP4P55087 323 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 CBX3Q13185 183 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 TMEM177Q53S58 311 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 BVESQ8NE79 360 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 OR9G4Q8NGQ1 327 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 OR10J5Q8NHC4 309 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 TINAGL1Q9GZM7 467 aaPredicted RBP10.79□□□□□ -0.68
SNHG1-213ENST00000540725 CCDC90BQ9GZT6 254 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 RAB22AQ9UL26 194 aa10.79□□□□□ -0.68
SNHG1-213ENST00000540725 SHOXO15266 292 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 BRI3O95415 125 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 DIRAS3O95661 229 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 AADACP22760 399 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 PSMD7P51665 324 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 SYNJ2BPP57105 145 aa10.78□□□□□ -0.68
SNHG1-213ENST00000540725 TAGLNQ01995 201 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms