RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 FAM90A16PA6NEW6 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A20PA6NIJ5 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A8PA6NJQ4 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A7PA6NKC0 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A22PA8MWA6 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A12PA8MX19 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A5PA8MXJ8 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A23PA8MXZ1 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 HBE1P02100 147 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A15PP0C7V4 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A13PP0C7W8 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A14PP0C7W9 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM90A24PP0C7X0 464 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 HCFC1P51610 2035 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
INO80E-203ENST00000540562 TNFRSF9Q07011 255 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 C16orf82Q7Z2V1 217 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 ZNRF1Q8ND25 227 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 Q8NFD4 153 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 OR2Z1Q8NG97 314 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 NANOS1Q8WY41 292 aaKnown RBP11.84□□□□□ -0.51
INO80E-203ENST00000540562 DERL1Q9BUN8 251 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 GNG12Q9UBI6 72 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 CD59P13987 128 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 COL10A1Q03692 680 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 RPL39P5Q59GN2 51 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 SAXO1Q8IYX7 474 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 OR10G4Q8NGN3 311 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 OR10G9Q8NGN4 311 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 OR10G7Q8NGN6 311 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 CA5BP1Q8WTZ4 195 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 PRO3102Q9H379 93 aa11.84□□□□□ -0.51
INO80E-203ENST00000540562 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
INO80E-203ENST00000540562 A0A1B0GUS0 222 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
INO80E-203ENST00000540562 MYOD1P15172 320 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 GAMTQ14353 236 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 H2BFWTQ7Z2G1 175 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 FDCSPQ8NFU4 85 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 COQ2Q96H96 371 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 OPN3Q9H1Y3 402 aaPredicted RBP11.83□□□□□ -0.52
INO80E-203ENST00000540562 RIMS4Q9H426 269 aaPredicted RBP11.83□□□□□ -0.52
INO80E-203ENST00000540562 ZGRF1Q86YA3 2104 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 NCR3LG1Q68D85 454 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 C1orf87Q8N0U7 546 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 DTD1Q8TEA8 209 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 PCGF1Q9BSM1 259 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 POLDIP2Q9Y2S7 368 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 CD81P60033 236 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 LRRC75BQ2VPJ9 315 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 ASPHD1Q5U4P2 390 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 FAM122AQ96E09 287 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 YPEL4Q96NS1 127 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 QTRT1Q9BXR0 403 aaKnown RBP11.83□□□□□ -0.52
INO80E-203ENST00000540562 ZNRD1Q9P1U0 126 aa11.83□□□□□ -0.52
INO80E-203ENST00000540562 IFNA10P01566 189 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 BRWD1-AS2P59051 145 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
INO80E-203ENST00000540562 P2RY6Q15077 328 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 TRAV3A0A0B4J244 114 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 ZNF705GA8MUZ8 300 aaPredicted RBP11.82□□□□□ -0.52
INO80E-203ENST00000540562 CLDN34H7C241 214 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 HOXA5P20719 270 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
INO80E-203ENST00000540562 LRRC29Q8WV35 223 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 RAB24Q969Q5 203 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 CACNA1BQ00975 2339 aa11.82□□□□□ -0.52
INO80E-203ENST00000540562 BTBD17A6NE02 478 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 SS18L1O75177 396 aaPredicted RBP11.81□□□□□ -0.52
INO80E-203ENST00000540562 CDX1P47902 265 aaPredicted RBP11.81□□□□□ -0.52
INO80E-203ENST00000540562 ZNF83P51522 516 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 Q6ZS49 121 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 SPRY4Q9C004 299 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 LRBAP50851 2863 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 TMEM30CPA0ZSE6 113 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 PAX6P26367 422 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 HOXA6P31267 233 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 TMEM41BQ5BJD5 291 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 ABHD12Q8N2K0 398 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 RPRMLQ8N4K4 120 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 C9orf106Q8NAJ2 232 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 OR10P1Q8NGE3 313 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 PARLQ9H300 379 aa11.81□□□□□ -0.52
INO80E-203ENST00000540562 ASH1LQ9NR48 2969 aaKnown RBP11.81□□□□□ -0.52
INO80E-203ENST00000540562 SPTAN1Q13813 2472 aaKnown RBP11.81□□□□□ -0.52
INO80E-203ENST00000540562 TNRC6BQ9UPQ9 1833 aaKnown RBP11.81□□□□□ -0.52
INO80E-203ENST00000540562 PHOX2AO14813 284 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 SPRY3O43610 288 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 WT1P19544 449 aaPredicted RBP11.8□□□□□ -0.52
INO80E-203ENST00000540562 GZMHP20718 246 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 ATP5G3P48201 142 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
INO80E-203ENST00000540562 ZNF709Q8N972 641 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 GP6Q9HCN6 339 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
INO80E-203ENST00000540562 M0R1X1 148 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms