RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 DIABLOQ9NR28 239 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 LINC00473A8K010 186 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 XRCC3O43542 346 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 RBBP9O75884 186 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 GABARAPO95166 117 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 IGLV2-14P01704 120 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 IGHG4P01861 327 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 APOA2P02652 100 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 PF4P02776 101 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
UBE3B-212ENST00000540230 RPS16P62249 146 aaKnown RBP11.79□□□□□ -0.52
UBE3B-212ENST00000540230 CX3CL1P78423 397 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 PLGLAQ15195 96 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 CTF1Q16619 201 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 ANKRD13BQ86YJ7 626 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 BEST4Q8NFU0 473 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 SNAPC3Q92966 411 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 METTL1Q9UBP6 276 aaKnown RBP11.79□□□□□ -0.52
UBE3B-212ENST00000540230 ZNF580Q9UK33 172 aa11.79□□□□□ -0.52
UBE3B-212ENST00000540230 IGLV2-23P01705 113 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 HLA-DQB1P01920 261 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
UBE3B-212ENST00000540230 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 EGR2P11161 476 aaPredicted RBP11.78□□□□□ -0.52
UBE3B-212ENST00000540230 PSMB8P28062 276 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 DUTP33316 252 aaKnown RBP11.78□□□□□ -0.52
UBE3B-212ENST00000540230 FOXE3Q13461 319 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 GPR107Q5VW38 600 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 RNF152Q8N8N0 203 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 BVESQ8NE79 360 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 DDB2Q92466 427 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 RNF5Q99942 180 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 FAM103A1Q9BTL3 118 aaKnown RBP11.78□□□□□ -0.52
UBE3B-212ENST00000540230 MRPS26Q9BYN8 205 aaKnown RBP11.78□□□□□ -0.52
UBE3B-212ENST00000540230 KLK15Q9H2R5 256 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 ZFP57Q9NU63 452 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 OR2W1Q9Y3N9 320 aa11.78□□□□□ -0.52
UBE3B-212ENST00000540230 SRRM4A7MD48 611 aaKnown RBP11.77□□□□□ -0.52
UBE3B-212ENST00000540230 NUDT19A8MXV4 375 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 SLC25A17O43808 307 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 TUSC2O75896 110 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 CA2P00918 260 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 ELANEP08246 267 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 IGLL1P15814 213 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 ALDH3B2P48448 385 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 THBS3P49746 956 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 LUMP51884 338 aaPredicted RBP11.77□□□□□ -0.52
UBE3B-212ENST00000540230 TAS2R20P59543 309 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 SSBP2P81877 361 aaPredicted RBP11.77□□□□□ -0.52
UBE3B-212ENST00000540230 ECSCRQ19T08 205 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 DEFB136Q30KP8 78 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 C19orf54Q5BKX5 351 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.52
UBE3B-212ENST00000540230 ZNF645Q8N7E2 425 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 WFDC9Q8NEX5 89 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 FLYWCH2Q96CP2 140 aaKnown RBP11.77□□□□□ -0.52
UBE3B-212ENST00000540230 S100A16Q96FQ6 103 aaKnown RBP11.77□□□□□ -0.52
UBE3B-212ENST00000540230 GON7Q9BXV9 100 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.52
UBE3B-212ENST00000540230 TRAV41A0A0B4J266 112 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 SOX15O60248 233 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 PRB2P02812 416 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 CD33P20138 364 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 ARPC4P59998 168 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 RPL30P62888 115 aaKnown RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 TMEM69Q5SWH9 247 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 ZNF695Q8IW36 515 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 CASTOR1Q8WTX7 329 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 HARBI1Q96MB7 349 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 A3GALT2U3KPV4 340 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 ARPC1BO15143 372 aaKnown RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 SPDEFO95238 335 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 CRYGBP07316 175 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 OR5H8P0DN80 308 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 AADACP22760 399 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 CRIP2P52943 208 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 PJVKQ0ZLH3 352 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 TMEM177Q53S58 311 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 KPRPQ5T749 579 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 ZNF660Q6AZW8 331 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 MINDY2Q8NBR6 621 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 MYOZ3Q8TDC0 251 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 GPHA2Q96T91 129 aa11.76□□□□□ -0.53
UBE3B-212ENST00000540230 RBMX2Q9Y388 322 aaKnown RBP11.76□□□□□ -0.53
UBE3B-212ENST00000540230 HPGDSO60760 199 aa11.75□□□□□ -0.53
UBE3B-212ENST00000540230 CRYZL1O95825 349 aa11.75□□□□□ -0.53
UBE3B-212ENST00000540230 IGLV1-40P01703 118 aa11.75□□□□□ -0.53
UBE3B-212ENST00000540230 FCGR2CP31995 323 aa11.75□□□□□ -0.53
UBE3B-212ENST00000540230 EIF4EBP1Q13541 118 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-212ENST00000540230 MRGPRG-AS1Q2M3A8 158 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms