RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 GADD45AP24522 165 aa13□□□□□ -0.33
DDB1-215ENST00000539712 ECSCRQ19T08 205 aa13□□□□□ -0.33
DDB1-215ENST00000539712 DEFB121Q5J5C9 76 aa13□□□□□ -0.33
DDB1-215ENST00000539712 ZNF562Q6V9R5 426 aa13□□□□□ -0.33
DDB1-215ENST00000539712 OR1N2Q8NGR9 330 aa13□□□□□ -0.33
DDB1-215ENST00000539712 DPF1Q92782 380 aa13□□□□□ -0.33
DDB1-215ENST00000539712 OR5B12Q96R08 314 aa13□□□□□ -0.33
DDB1-215ENST00000539712 FAM103A1Q9BTL3 118 aaKnown RBP13□□□□□ -0.33
DDB1-215ENST00000539712 METTL1Q9UBP6 276 aaKnown RBP13□□□□□ -0.33
DDB1-215ENST00000539712 STUB1Q9UNE7 303 aa13□□□□□ -0.33
DDB1-215ENST00000539712 FOXA2Q9Y261 457 aaPredicted RBP13□□□□□ -0.33
DDB1-215ENST00000539712 METTL21EPA6NDL7 271 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 ARPC1BO15143 372 aaKnown RBP12.99□□□□□ -0.33
DDB1-215ENST00000539712 DGCR2P98153 550 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 AKIRIN2Q53H80 203 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 ZNF773Q6PK81 442 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 PDPNQ86YL7 162 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 OR10J5Q8NHC4 309 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 FCGR1BQ92637 280 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 ALX4Q9H161 411 aaPredicted RBP12.99□□□□□ -0.33
DDB1-215ENST00000539712 ATG5Q9H1Y0 275 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 OR2D2Q9H210 308 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 OR51E2Q9H255 320 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 A3GALT2U3KPV4 340 aa12.99□□□□□ -0.33
DDB1-215ENST00000539712 KMT2CQ8NEZ4 4911 aaKnown RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 A0A1W2PN81 502 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 SRRM4A7MD48 611 aaKnown RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 SPDEFO95238 335 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 CA2P00918 260 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 CHRNA7P36544 502 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 RPS16P62249 146 aaKnown RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 MRPS15P82914 257 aaKnown RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 PJVKQ0ZLH3 352 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 PLGLAQ15195 96 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 TPRA1Q86W33 373 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 H1FOOQ8IZA3 346 aaPredicted RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 TCTEX1D1Q8N7M0 179 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 FLYWCH2Q96CP2 140 aaKnown RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 TSNAXQ99598 290 aaKnown RBP12.98□□□□□ -0.33
DDB1-215ENST00000539712 Q9H521 79 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
DDB1-215ENST00000539712 SEC14L6B5MCN3 397 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 SLC25A17O43808 307 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 CLEC2LP0C7M8 214 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 DTYMKP23919 212 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 SDC2P34741 201 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 ZNF616Q08AN1 781 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 C9orf66Q5T8R8 295 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 HACD4Q5VWC8 232 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 DDB2Q92466 427 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 SLC35D1Q9NTN3 355 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 DAPK2Q9UIK4 370 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 LSM4Q9Y4Z0 139 aaKnown RBP12.97□□□□□ -0.33
DDB1-215ENST00000539712 TNCP24821 2201 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 NBEAL2Q6ZNJ1 2754 aa12.97□□□□□ -0.33
DDB1-215ENST00000539712 HUWE1Q7Z6Z7 4374 aaKnown RBP12.97□□□□□ -0.33
DDB1-215ENST00000539712 SSX5O60225 188 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 APOA2P02652 100 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 TMEM267Q0VDI3 215 aaPredicted RBP12.96□□□□□ -0.33
DDB1-215ENST00000539712 TMEM177Q53S58 311 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 ACTBL2Q562R1 376 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 C11orf87Q6NUJ2 197 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 UNQ5815/PRO19632Q6UWF5 114 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 DCUN1D4Q92564 292 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 SSR3Q9UNL2 185 aa12.96□□□□□ -0.33
DDB1-215ENST00000539712 RRP15Q9Y3B9 282 aaKnown RBP12.96□□□□□ -0.33
DDB1-215ENST00000539712 LINC00473A8K010 186 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 RAMP3O60896 148 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 DUTP33316 252 aaKnown RBP12.95□□□□□ -0.34
DDB1-215ENST00000539712 TALDO1P37837 337 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 LGALS7P47929 136 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 FXYD3Q14802 87 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 BVESQ8NE79 360 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 LGALS14Q8TCE9 139 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 ABHD5Q8WTS1 349 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 ARPC1AQ92747 370 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
DDB1-215ENST00000539712 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 ST6GALNAC5Q9BVH7 336 aa12.95□□□□□ -0.34
DDB1-215ENST00000539712 TMEM235A6NFC5 223 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 IGLV2-14P01704 120 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 LGALS1P09382 135 aaKnown RBP12.94□□□□□ -0.34
DDB1-215ENST00000539712 SLURP1P55000 103 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 ARL6IP1Q15041 203 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 OR5H6Q8NGV6 325 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 NUDCD2Q8WVJ2 157 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 SLC25A38Q96DW6 304 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 RHOVQ96L33 236 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 PRR25Q96S07 402 aa12.94□□□□□ -0.34
DDB1-215ENST00000539712 GINS4Q9BRT9 223 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms