RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 NECAP2Q9NVZ3 263 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 KLK11Q9UBX7 282 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 ADAM30Q9UKF2 790 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 WASHC3Q9Y3C0 194 aa12.46□□□□□ -0.42
RPAIN-206ENST00000539417 OR5H14A6NHG9 310 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 H7C2Y5 167 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 DUTP33316 252 aaKnown RBP12.45□□□□□ -0.42
RPAIN-206ENST00000539417 DGCR2P98153 550 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 EIF4EBP1Q13541 118 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-206ENST00000539417 OVCH2Q7RTZ1 564 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 MCFD2Q8NI22 146 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 DDB2Q92466 427 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 EHFQ9NZC4 300 aa12.45□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF107Q9UII5 783 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-206ENST00000539417 PPYP01298 95 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 IGHG2P01859 326 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 HRH1P35367 487 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 FXYD4P59646 89 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 TCTEX1D4Q5JR98 221 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF645Q8N7E2 425 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 BVESQ8NE79 360 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 NPBQ8NG41 125 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 FBXL15Q9H469 300 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 SCPEP1Q9HB40 452 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 SLC35D1Q9NTN3 355 aa12.44□□□□□ -0.42
RPAIN-206ENST00000539417 LIN7CQ9NUP9 197 aaKnown RBP12.44□□□□□ -0.42
RPAIN-206ENST00000539417 RBMX2Q9Y388 322 aaKnown RBP12.44□□□□□ -0.42
RPAIN-206ENST00000539417 FCN1O00602 326 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 NBR2O15453 112 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 NDUFA3O95167 84 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 TNFSF8P32971 234 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 MC5RP33032 325 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 OR8H1Q8NGG4 311 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 SECTM1Q8WVN6 248 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 GIMAP1Q8WWP7 306 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 DIRAS2Q96HU8 199 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 RASL11BQ9BPW5 248 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 TPSG1Q9NRR2 321 aa12.43□□□□□ -0.42
RPAIN-206ENST00000539417 SRRM4A7MD48 611 aaKnown RBP12.42□□□□□ -0.42
RPAIN-206ENST00000539417 M0QYG6 137 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 SULT1C2O00338 296 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 C5orf64Q2M2E5 130 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 OR2B11Q5JQS5 317 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 DHRS11Q6UWP2 260 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 SLC35E3Q7Z769 313 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 OR5H2Q8NGV7 314 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 SOSTQ9BQB4 213 aa12.42□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF2Q9BSG1 426 aaPredicted RBP12.42□□□□□ -0.42
RPAIN-206ENST00000539417 TNFSF12O43508 249 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 IGLV2-23P01705 113 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 RCVRNP35243 200 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 THBS3P49746 956 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 NDPQ00604 133 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 PSG5Q15238 335 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 TMEM17Q86X19 198 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 PDPNQ86YL7 162 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 OR5AU1Q8NGC0 362 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 SLC5A7Q9GZV3 580 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 FXYD6Q9H0Q3 95 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 TAS2R8Q9NYW2 309 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 MTFP1Q9UDX5 166 aa12.41□□□□□ -0.42
RPAIN-206ENST00000539417 IGHV7-81A0A0B4J1V7 117 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 ADARB2-AS1A8MUL3 147 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 RRHO14718 337 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 APOA2P02652 100 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 TAS2R46P59540 309 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 RPS16P62249 146 aaKnown RBP12.4□□□□□ -0.42
RPAIN-206ENST00000539417 ZNF818PQ6ZRF7 136 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 CENPVQ7Z7K6 275 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-206ENST00000539417 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 CLCC1Q96S66 551 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-206ENST00000539417 TINAGL1Q9GZM7 467 aaPredicted RBP12.4□□□□□ -0.42
RPAIN-206ENST00000539417 FBXO7Q9Y3I1 522 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 PLXNB1O43157 2135 aa12.4□□□□□ -0.42
RPAIN-206ENST00000539417 FBXO24O75426 580 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 TSPAN15O95858 294 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 CD3DP04234 171 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 GNRHRP30968 328 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 PJVKQ0ZLH3 352 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 IL18Q14116 193 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 MRGPRG-AS1Q2M3A8 158 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 STPG2Q8N412 459 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 MFSD4AQ8N468 514 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 MOB3AQ96BX8 217 aa12.4□□□□□ -0.43
RPAIN-206ENST00000539417 FLYWCH2Q96CP2 140 aaKnown RBP12.4□□□□□ -0.43
RPAIN-206ENST00000539417 METTL1Q9UBP6 276 aaKnown RBP12.4□□□□□ -0.43
RPAIN-206ENST00000539417 TET2Q6N021 2002 aaPredicted RBP12.39□□□□□ -0.43
RPAIN-206ENST00000539417 GABARAPH6UMI1 98 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 SLC25A17O43808 307 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 FCGR3BO75015 233 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 RBBP9O75884 186 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 TPPPO94811 219 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 CRYZL1O95825 349 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
RPAIN-206ENST00000539417 CRYGBP07316 175 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms