RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 J3QRK9 145 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 OR5H8P0DN80 308 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 PSMB8P28062 276 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 SLC6A1P30531 599 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 RPS16P62249 146 aaKnown RBP12.25□□□□□ -0.45
CIT-210ENST00000539413 CX3CL1P78423 397 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 MRPL41Q8IXM3 137 aaKnown RBP12.25□□□□□ -0.45
CIT-210ENST00000539413 CLCC1Q96S66 551 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 METTL1Q9UBP6 276 aaKnown RBP12.25□□□□□ -0.45
CIT-210ENST00000539413 ANXA10Q9UJ72 324 aa12.25□□□□□ -0.45
CIT-210ENST00000539413 A0A0A6YYH2 397 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 A6NJ64 397 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 TMEM127O75204 238 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 CTXN2P0C2S0 81 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 PTHLHP12272 177 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 NFYAP23511 347 aaPredicted RBP12.24□□□□□ -0.45
CIT-210ENST00000539413 MYCNOSP40205 109 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 CDX1P47902 265 aaPredicted RBP12.24□□□□□ -0.45
CIT-210ENST00000539413 DEFB136Q30KP8 78 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 ZNF660Q6AZW8 331 aaPredicted RBP12.24□□□□□ -0.45
CIT-210ENST00000539413 CROCCP3Q8IVE0 287 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 FLYWCH2Q96CP2 140 aaKnown RBP12.24□□□□□ -0.45
CIT-210ENST00000539413 P2RX4Q99571 388 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 TSNAXQ99598 290 aaKnown RBP12.24□□□□□ -0.45
CIT-210ENST00000539413 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 KLK15Q9H2R5 256 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 DIABLOQ9NR28 239 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 TPSG1Q9NRR2 321 aa12.24□□□□□ -0.45
CIT-210ENST00000539413 SLC25A17O43808 307 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 SPDEFO95238 335 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 CA2P00918 260 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 IGLV1-40P01703 118 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 SMIM18P0DKX4 95 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 EGR2P11161 476 aaPredicted RBP12.23□□□□□ -0.45
CIT-210ENST00000539413 NCS1P62166 190 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 ECSCRQ19T08 205 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 FOXB2Q5VYV0 432 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 CNIH2Q6PI25 160 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 GVQW1Q8N7I0 195 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 BVESQ8NE79 360 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 RCC1LQ96I51 464 aaKnown RBP12.23□□□□□ -0.45
CIT-210ENST00000539413 RAX2Q96IS3 184 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 FAM103A1Q9BTL3 118 aaKnown RBP12.23□□□□□ -0.45
CIT-210ENST00000539413 AUNIPQ9H7T9 357 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 OR2W1Q9Y3N9 320 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 A3GALT2U3KPV4 340 aa12.23□□□□□ -0.45
CIT-210ENST00000539413 A0A1W2PN81 502 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 CCL24O00175 119 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 IGLV2-23P01705 113 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 DUTP33316 252 aaKnown RBP12.22□□□□□ -0.45
CIT-210ENST00000539413 CHRNA7P36544 502 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 CRIP2P52943 208 aaPredicted RBP12.22□□□□□ -0.45
CIT-210ENST00000539413 C19orf54Q5BKX5 351 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 MINDY2Q8NBR6 621 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 OR13F1Q8NGS4 319 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 MYOZ3Q8TDC0 251 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 ABHD5Q8WTS1 349 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 DDB2Q92466 427 aa12.22□□□□□ -0.45
CIT-210ENST00000539413 NOTCH1P46531 2555 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 IGKV1D-13A0A0B4J2D9 117 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 LINC00473A8K010 186 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 SOX15O60248 233 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 HLA-DQB1P01920 261 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 FCER2P06734 321 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 IGKV1-13P0DP09 117 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.45
CIT-210ENST00000539413 VBP1P61758 197 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 KIAA0141Q14154 515 aaPredicted RBP12.21□□□□□ -0.45
CIT-210ENST00000539413 TMEM177Q53S58 311 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 UBE2NLQ5JXB2 153 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 TMEM65Q6PI78 240 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 ZNF562Q6V9R5 426 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 HOGA1Q86XE5 327 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 ZNF645Q8N7E2 425 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 BEST4Q8NFU0 473 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 SLC25A46Q96AG3 418 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 HARBI1Q96MB7 349 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 GNB4Q9HAV0 340 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 NECAP2Q9NVZ3 263 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 NUBP2Q9Y5Y2 271 aa12.21□□□□□ -0.45
CIT-210ENST00000539413 MEIS3P1A6NDR6 274 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 ARPC1BO15143 372 aaKnown RBP12.2□□□□□ -0.46
CIT-210ENST00000539413 SHOXO15266 292 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 XRCC3O43542 346 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 DUS4LO95620 317 aaKnown RBP12.2□□□□□ -0.46
CIT-210ENST00000539413 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 CRYGBP07316 175 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 LGALS7P47929 136 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 RAB9AP51151 201 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 RAB25P57735 213 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 ARPC4P59998 168 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
CIT-210ENST00000539413 TAGLNQ01995 201 aaKnown RBP12.2□□□□□ -0.46
CIT-210ENST00000539413 CBX3Q13185 183 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 PPP1R27Q86WC6 154 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 SAMD12Q8N8I0 201 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 ZNF491Q8N8L2 437 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 CASTOR1Q8WTX7 329 aa12.2□□□□□ -0.46
CIT-210ENST00000539413 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms