RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 LRTM2Q8N967 370 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 RBPMSQ93062 196 aaKnown RBP12.56□□□□□ -0.4
VAMP1-207ENST00000539047 GPHA2Q96T91 129 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 SPIN2AQ99865 258 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 SPIN2BQ9BPZ2 258 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 AUP1Q9Y679 476 aa12.56□□□□□ -0.4
VAMP1-207ENST00000539047 MAP1AP78559 2803 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-207ENST00000539047 SPG11Q96JI7 2443 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 A0A096LNT2 108 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 BUB1B-PAK6H3BSN5 160 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 RBFOX2O43251 390 aaKnown RBP eCLIP12.55□□□□□ -0.4
VAMP1-207ENST00000539047 IGLV1-47P01700 117 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 RAB13P51153 203 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 UBE2E1P51965 193 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 AKR1C2P52895 323 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 ERVK-16P61578 105 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 CD83Q01151 205 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 PAX8Q06710 450 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 KLRD1Q13241 179 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 EIF4EBP1Q13541 118 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-207ENST00000539047 UTF1Q5T230 341 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 THOC7Q6I9Y2 204 aaKnown RBP12.55□□□□□ -0.4
VAMP1-207ENST00000539047 DHRS7BQ6IAN0 325 aaPredicted RBP12.55□□□□□ -0.4
VAMP1-207ENST00000539047 CCDC144NLQ6NUI1 221 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 ODF3L1Q8IXM7 274 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 OR5M8Q8NGP6 311 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 LHX4Q969G2 390 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 TMEM56Q96MV1 263 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 TMED3Q9Y3Q3 217 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 TBL2Q9Y4P3 447 aaKnown RBP12.55□□□□□ -0.4
VAMP1-207ENST00000539047 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 TMEM56-RWDD3S4R434 201 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 CR1P17927 2039 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 ARHGAP32A7KAX9 2087 aa12.55□□□□□ -0.4
VAMP1-207ENST00000539047 OOSP1A8MZH6 123 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 FCGR3BO75015 233 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 CDS2O95674 445 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 HOXB5P09067 269 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 MMP9P14780 707 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
VAMP1-207ENST00000539047 TMEM249Q2WGJ8 235 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 KRTAP1-3Q8IUG1 177 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 DRAXINQ8NBI3 349 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-207ENST00000539047 OR11H7Q8NGC8 314 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 OR4P4Q8NGL7 312 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 MSI2Q96DH6 328 aaKnown RBP12.54□□□□□ -0.4
VAMP1-207ENST00000539047 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
VAMP1-207ENST00000539047 C5orf30Q96GV9 206 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 TBX15Q96SF7 602 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 AIFM2Q9BRQ8 373 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 ZNF436Q9C0F3 470 aaPredicted RBP12.54□□□□□ -0.4
VAMP1-207ENST00000539047 C7orf69Q9H7B7 122 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 SLC35D1Q9NTN3 355 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 PRR13Q9NZ81 148 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 ZNRD1Q9P1U0 126 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 DPM3Q9P2X0 92 aa12.54□□□□□ -0.4
VAMP1-207ENST00000539047 HIVEP1P15822 2718 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 C13orf42A0A1B0GVH6 325 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 DBX1A6NMT0 343 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 LINC00473A8K010 186 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 ODF3BA8MYP8 253 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 H7C2Y5 167 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 HPRT1P00492 218 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 TGFAP01135 160 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 GIPP09681 153 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-207ENST00000539047 MC5RP33032 325 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 LPAR6P43657 344 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 DLX1P56177 255 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 RAP2BP61225 183 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
VAMP1-207ENST00000539047 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
VAMP1-207ENST00000539047 MIDNQ504T8 468 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 TPTE2P1Q5T6R2 138 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 GPR157Q5UAW9 335 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 SLC35G3Q8N808 338 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 ZNF251Q9BRH9 671 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 MRPL20Q9BYC9 149 aaKnown RBP12.53□□□□□ -0.4
VAMP1-207ENST00000539047 PLEKHA2Q9HB19 425 aa12.53□□□□□ -0.4
VAMP1-207ENST00000539047 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 CCSO14618 274 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 HLA-GP17693 338 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 VDAC1P21796 283 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 REG1BP48304 166 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 PRB3Q04118 309 aaPredicted RBP12.52□□□□□ -0.41
VAMP1-207ENST00000539047 PDPNQ86YL7 162 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 FAM219AQ8IW50 185 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 PDZD9Q8IXQ8 264 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.41
VAMP1-207ENST00000539047 OR8H3Q8N146 312 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 TEX29Q8N6K0 151 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 WFDC11Q8NEX6 87 aa12.52□□□□□ -0.41
VAMP1-207ENST00000539047 ST6GALNAC6Q969X2 333 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms