RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 NDUFA5Q16718 116 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 TMEM128Q5BJH2 165 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 LIN54Q6MZP7 749 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 CCDC71LQ8N9Z2 235 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 ZNF383Q8NA42 475 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 ALX4Q9H161 411 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 GHITMQ9H3K2 345 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 RANGRFQ9HD47 186 aaPredicted RBP12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 GAB2Q9UQC2 676 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 HILPDAQ9Y5L2 63 aa12.67□□□□□ -0.38
SFSWAP-206ENST00000537582 IGHV1-69DA0A0B4J2H0 117 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 C3orf85A0A1B0GTC6 90 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 NPFFO15130 113 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 RAMP3O60896 148 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 SFT2D2O95562 160 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 DHFRP00374 187 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 IGHV1-69P01742 117 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 IL5P05113 134 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 F2RP25116 425 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 HTR1DP28221 377 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 TAS2R31P59538 309 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 MSMO1Q15800 293 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 ANKRD55Q3KP44 614 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 CSPG4Q6UVK1 2322 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 KCTD9Q7L273 389 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 LYG2Q86SG7 212 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 FAM216AQ8WUB2 273 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 TCTEX1D2Q8WW35 142 aa12.66□□□□□ -0.38
SFSWAP-206ENST00000537582 IGHV3-72A0A0B4J1Y9 119 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 J3QLI3 93 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 SLC22A5O76082 557 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 IL17RELQ6ZVW7 336 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 ZBTB34Q8NCN2 500 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 LHFPL5Q8TAF8 219 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 FYTTD1Q96QD9 318 aaKnown RBP12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 S1PR3Q99500 378 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 DPM3Q9P2X0 92 aa12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
SFSWAP-206ENST00000537582 C1QBP02746 253 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 IL3RAP26951 378 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 TMEM187Q14656 261 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 SSX2Q16385 188 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 ZNF585BQ52M93 769 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 FBLN7Q53RD9 439 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 TGIF2LXQ8IUE1 241 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 ZNF431Q8TF32 576 aaPredicted RBP12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 GLYATL2Q8WU03 294 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 DDB2Q92466 427 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 RPEQ96AT9 228 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 C18orf12Q96KH6 178 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 HSD17B10Q99714 261 aaKnown RBP12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 NABP2Q9BQ15 211 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 A0A1W2PPI3 338 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 LEUTXA8MZ59 168 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 CD5LO43866 347 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 IFNA2P01563 188 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 LGALS4P56470 323 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 CD83Q01151 205 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 C2orf68Q2NKX9 166 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 GPR157Q5UAW9 335 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 ZNF66Q6ZN08 573 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 OR51J1Q9H342 316 aa12.64□□□□□ -0.39
SFSWAP-206ENST00000537582 TLN2Q9Y4G6 2542 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 IGHV1-3A0A0C4DH29 117 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 A0A0U1RQK1 487 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 H0Y980 276 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 PRAF2O60831 178 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 FCGR3BO75015 233 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 FSHBP01225 129 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 IGKV1-39P01597 117 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 IGKV1D-39P04432 117 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 EPHA1P21709 976 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 S100GP29377 79 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 ZNF816Q0VGE8 651 aaPredicted RBP12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 SPAG16Q8N0X2 631 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 C22orf15Q8WYQ4 148 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 GALNT14Q96FL9 552 aa12.63□□□□□ -0.39
SFSWAP-206ENST00000537582 H0YJW9 148 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 TIMM23O14925 209 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 CREBL2O60519 120 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 GAPDHP04406 335 aaKnown RBP12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 IGKV1-16P04430 117 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 RPA2P15927 270 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 CD24P25063 80 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 THBS3P49746 956 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 CATR1Q13166 79 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 MIDNQ504T8 468 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 MINOS1Q5TGZ0 78 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 FAM71F2Q6NXP2 309 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 SPNS3Q6ZMD2 512 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 MOB3BQ86TA1 216 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 MITD1Q8WV92 249 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 TMEM222Q9H0R3 208 aa12.62□□□□□ -0.39
SFSWAP-206ENST00000537582 SLA2Q9H6Q3 261 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms