RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 VHLLQ6RSH7 139 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 TMEM108Q6UXF1 575 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.71□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF439Q8NDP4 499 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 OR10G4Q8NGN3 311 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 RARRES2Q99969 163 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 RAB9BQ9NP90 201 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 FBXO7Q9Y3I1 522 aa7.71□□□□□ -1.18
UBE3B-207ENST00000537063 USF3Q68DE3 2245 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 MARCH11A6NNE9 402 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 HSPB1P04792 205 aaKnown RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 FOLR2P14207 255 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 SELENOVP59797 346 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 FLI1Q01543 452 aaPredicted RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 PMS2P11Q13670 270 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF726P1Q15940 193 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 ATP6V1FQ16864 119 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 TMEM30BQ3MIR4 351 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF788Q6ZQV5 615 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 CORO2AQ92828 525 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 CIB3Q96Q77 187 aaPredicted RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 DIRC2Q96SL1 478 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 TUBA4BQ9H853 241 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 ZFHX2Q9C0A1 2572 aaPredicted RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 KBTBD11-OT1A0A1B0GTJ5 212 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 COLCA2A8K830 154 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 LY86O95711 162 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 HPRT1P00492 218 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 KIR2DS2P43631 304 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 AWAT1Q58HT5 328 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 SPANXN5Q5MJ07 72 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 H2BFWTQ7Z2G1 175 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 RSG1Q9BU20 258 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 GFOD1Q9NXC2 390 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 CLN8Q9UBY8 286 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 ANKRD11Q6UB99 2663 aaPredicted RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 SCAF4O95104 1147 aaKnown RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 ARG1P05089 322 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 TNFSF4P23510 183 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 RAB7AP51149 207 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 LINC00205P59089 165 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 RHEBQ15382 184 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 TAF15Q92804 592 aaKnown RBP eCLIP7.7□□□□□ -1.18
UBE3B-207ENST00000537063 R3HDM4Q96D70 268 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 SMCO4Q9NRQ5 59 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 RPRMQ9NS64 109 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 GNG12Q9UBI6 72 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 LAMA5O15230 3695 aa7.7□□□□□ -1.18
UBE3B-207ENST00000537063 CEP250Q9BV73 2442 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 MEX3AA1L020 520 aaKnown RBP7.69□□□□□ -1.18
UBE3B-207ENST00000537063 DPRXA6NFQ7 191 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 SELLP14151 372 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ADIPOQQ15848 244 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 TMEM41BQ5BJD5 291 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ALKBH2Q6NS38 261 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 LILRB2Q8N423 598 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 C15orf54Q8N8G6 183 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 OR52E5Q8NH55 327 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 MGAQ8IWI9 3026 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 SVILO95425 2214 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 LOC102723971A0A1B0GUV8 181 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ZG16O60844 167 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 OR9G9P0C7N8 305 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 GNB2P62879 340 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 KHDC3LQ587J8 217 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 FAM201AQ5SY85 155 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 DUX4L9Q6RFH8 374 aaPredicted RBP7.69□□□□□ -1.18
UBE3B-207ENST00000537063 GFRALQ6UXV0 394 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 C1orf229Q6ZS94 237 aaPredicted RBP7.69□□□□□ -1.18
UBE3B-207ENST00000537063 PINX1Q96BK5 328 aaKnown RBP7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF251Q9BRH9 671 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 TMEM147Q9BVK8 224 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 VSIRQ9H7M9 311 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 DYSFO75923 2080 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 SLC31A2O15432 143 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 UTF1Q5T230 341 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ETV3LQ6ZN32 361 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 SSX7Q7RTT5 188 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ZDHHC16Q969W1 377 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 AIFM2Q9BRQ8 373 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF665Q9H7R5 613 aa7.69□□□□□ -1.18
UBE3B-207ENST00000537063 C7orf77A4D0Y5 90 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 ZNF729A6NN14 1252 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-207ENST00000537063 CYB5R3P00387 301 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-207ENST00000537063 FOXC1Q12948 553 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 RXFP4Q8TDU9 374 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 SFT2D1Q8WV19 159 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
UBE3B-207ENST00000537063 C15orf62A8K5M9 175 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 H7C2Y5 167 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 EDDM3BP56851 147 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 RAB2AP61019 212 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 RPL39P5Q59GN2 51 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 CT45A1Q5HYN5 189 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 SLC25A24Q6NUK1 477 aa7.68□□□□□ -1.18
UBE3B-207ENST00000537063 CT45A3Q8NHU0 189 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms