RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 HIST1H1DP16402 221 aaKnown RBP11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 RAB6AP20340 208 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 TMEM267Q0VDI3 215 aaPredicted RBP11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 NR2C2APQ86WQ0 139 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 PDPNQ86YL7 162 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 FLYWCH2Q96CP2 140 aaKnown RBP11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 MS4A10Q96PG2 267 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 TSNAXQ99598 290 aaKnown RBP11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 CABLES2Q9BTV7 478 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 ATG5Q9H1Y0 275 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 SLC35D1Q9NTN3 355 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 SCOCQ9UIL1 159 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 RBM7Q9Y580 266 aaKnown RBP11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
RTN3P1-201ENST00000536295 SLC25A17O43808 307 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 TALDO1P37837 337 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 RUNX1Q01196 453 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 ACTBL2Q562R1 376 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 VAX1Q5SQQ9 334 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 UBE2UQ5VVX9 321 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 SPARTQ8N0X7 666 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 TCTEX1D1Q8N7M0 179 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 LFNGQ8NES3 379 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 GRPEL2Q8TAA5 225 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 DCUN1D4Q92564 292 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 B9D2Q9BPU9 175 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 GINS4Q9BRT9 223 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 SDHAF2Q9NX18 166 aa11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 ELF5Q9UKW6 265 aaPredicted RBP11.08□□□□□ -0.64
RTN3P1-201ENST00000536295 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 MRPS14O60783 128 aaKnown RBP11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 SPDEFO95238 335 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 GALP22466 123 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 SLURP1P55000 103 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 TPPP2P59282 170 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 DCTN2Q13561 401 aaKnown RBP11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 FXYD3Q14802 87 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 ZNF562Q6V9R5 426 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 ARPC1AQ92747 370 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 C5orf30Q96GV9 206 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 Q9H521 79 aa11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 TXNL4BQ9NX01 149 aaKnown RBP11.07□□□□□ -0.64
RTN3P1-201ENST00000536295 DNAH9Q9NYC9 4486 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 A0A087WW49 117 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 LINC01619G3V211 115 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 J3QRK9 145 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 OVOL1O14753 267 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 ARPC1BO15143 372 aaKnown RBP11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 CNIH1O95406 144 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 LY86O95711 162 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 CD40LGP29965 261 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 CDNFQ49AH0 187 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 PYHIN1Q6K0P9 492 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 BVESQ8NE79 360 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 DLX4Q92988 240 aaPredicted RBP11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 ZNF355PQ9NSJ1 428 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 DAPK2Q9UIK4 370 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 STUB1Q9UNE7 303 aa11.06□□□□□ -0.64
RTN3P1-201ENST00000536295 NOTOA8MTQ0 251 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 SAP30O75446 220 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 TRGV3P03979 118 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 FGF9P31371 208 aaPredicted RBP11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 PJVKQ0ZLH3 352 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 CBX3Q13185 183 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 OR5T1Q8NG75 326 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 FCGR1BQ92637 280 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 ST6GALNAC5Q9BVH7 336 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 SSR3Q9UNL2 185 aa11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 RRP15Q9Y3B9 282 aaKnown RBP11.05□□□□□ -0.64
RTN3P1-201ENST00000536295 SHOXO15266 292 aa11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 DIRAS3O95661 229 aa11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 LGALS7P47929 136 aa11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 ARL6IP1Q15041 203 aa11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 RTL8BQ17RB0 113 aa11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 H1FOOQ8IZA3 346 aaPredicted RBP11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 OR51E2Q9H255 320 aa11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
RTN3P1-201ENST00000536295 DTYMKP23919 212 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 INSL3P51460 131 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 SSBP2P81877 361 aaPredicted RBP11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 MXD1Q05195 221 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 SRSF7Q16629 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 HACD4Q5VWC8 232 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 ZNF773Q6PK81 442 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
RTN3P1-201ENST00000536295 TPRA1Q86W33 373 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms