RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 PAFAH1B3Q15102 231 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 MSMO1Q15800 293 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 MPV17LQ2QL34 196 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PRICKLE4Q2TBC4 344 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 FFAR4Q5NUL3 377 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 DCST2Q5T1A1 773 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CPTPQ5TA50 214 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 NCBP2-AS2Q69YL0 99 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 RPL7L1Q6DKI1 246 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 KCNIP4Q6PIL6 250 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 AGTRAPQ6RW13 159 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 DPPA3Q6W0C5 159 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 C19orf35Q6ZS72 473 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 Q6ZSR6 202 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 TPRG1Q6ZUI0 275 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CPEB2Q7Z5Q1 589 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 ZNF584Q8IVC4 421 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SAXO1Q8IYX7 474 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 TTC9CQ8N5M4 171 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SIGLECL1Q8N7X8 197 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 ZIC4Q8N9L1 334 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 APCDD1LQ8NCL9 501 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR4F17Q8NGA8 305 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR10P1Q8NGE3 313 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR51G1Q8NGK1 321 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR4C3Q8NH37 302 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR4L1Q8NH43 312 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CMTM2Q8TAZ6 248 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 SYNPRQ8TBG9 265 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 LGALS14Q8TCE9 139 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 BLNKQ8WV28 456 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 TMEM37Q8WXS4 190 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PP6455Q8WZ26 134 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 APOBEC3DQ96AK3 386 aaPredicted RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 FAM131CQ96AQ9 280 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 FGGYQ96C11 551 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PCED1BQ96HM7 432 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 RCHY1Q96PM5 261 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR4F4Q96R69 305 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 RASL10BQ96S79 203 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 P2RX4Q99571 388 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PMCHL2Q9BQD1 86 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 ANAPC13Q9BS18 74 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 EFCAB11Q9BUY7 163 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 RSPO3Q9BXY4 272 aaPredicted RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 ULBP2Q9BZM5 246 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 VN1R1Q9GZP7 353 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CHST6Q9GZX3 395 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PARLQ9H300 379 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 OR51I1Q9H343 314 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 MFSD1Q9H3U5 465 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 FAM124BQ9H5Z6 455 aaPredicted RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 ST20Q9HBF5 79 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 NPVFQ9HCQ7 196 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 NECAP2Q9NVZ3 263 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 FAM206AQ9NX38 181 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 THYN1Q9P016 225 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 THAP10Q9P2Z0 257 aaPredicted RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 GALPQ9UBC7 116 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PCTPQ9UKL6 214 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 PLAGL1Q9UM63 463 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 GPR132Q9UNW8 380 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 HS3ST2Q9Y278 367 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 CSDC2Q9Y534 153 aaKnown RBP2.05□□□□□ -2.08
SKA3-207ENST00000536239 WSB1Q9Y6I7 421 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 KIAA1671Q9BY89 1806 aa2.05□□□□□ -2.08
SKA3-207ENST00000536239 IGLV3-10A0A075B6K4 115 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TRAV9-1A0A075B6T8 112 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TRAV9-2A0A087WT02 112 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 A0A087WUU8 490 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TRAV1-1A0A0B4J248 108 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TRAV8-6A0A0B4J262 113 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 C13orf42A0A1B0GVH6 325 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TSPAN11A1L157 253 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 DPRXA6NFQ7 191 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 CD300LBA8K4G0 201 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 ZNF736B4DX44 427 aaPredicted RBP2.04□□□□□ -2.08
SKA3-207ENST00000536239 EEF1E1-BLOC1S5C9J1V9 151 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 ZNF878C9JN71 531 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 C17orf112F2Z3M2 114 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 H0YL77 283 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 H3BMH7 237 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 H3BRM9 83 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 K7N7A8 449 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TAPBPO15533 448 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 PHF1O43189 567 aaPredicted RBP2.04□□□□□ -2.08
SKA3-207ENST00000536239 SPINT2O43291 252 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 ERI3O43414 337 aaKnown RBP2.04□□□□□ -2.08
SKA3-207ENST00000536239 ZNF253O75346 499 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 UPK3AO75631 287 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 VENTXO95231 258 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 SFT2D2O95562 160 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 HRASP01112 189 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 HLA-DRB1P01911 266 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 ISG15P05161 165 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 DBIP07108 87 aaKnown RBP2.04□□□□□ -2.08
SKA3-207ENST00000536239 CRYGBP07316 175 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 TACSTD2P09758 323 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 LINC00869P0C866 280 aa2.04□□□□□ -2.08
SKA3-207ENST00000536239 CT45A10P0DMU9 189 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms