RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 A0A1W2PPZ6 126 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 GNRHRP30968 328 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 GFRA1P56159 465 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 PPP1CBP62140 327 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 TRIP6Q15654 476 aaKnown RBP11.87□□□□□ -0.51
LIG1-203ENST00000536218 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 ANAPC16Q96DE5 110 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 ABI3Q9P2A4 366 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 IGHV2OR16-5A0A0B4J2B6 119 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 IGHV2-70DA0A0C4DH43 119 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 SH2D1BO14796 132 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
LIG1-203ENST00000536218 ODF3L1Q8IXM7 274 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 PXMP4Q9Y6I8 212 aa11.87□□□□□ -0.51
LIG1-203ENST00000536218 C3orf85A0A1B0GTC6 90 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 C21orf140B9A014 251 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 MRPL33O75394 65 aaKnown RBP11.86□□□□□ -0.51
LIG1-203ENST00000536218 DHRS3O75911 302 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 TOMM40O96008 361 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 RPL15P61313 204 aaKnown RBP11.86□□□□□ -0.51
LIG1-203ENST00000536218 FAM89BQ8N5H3 189 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 SIGLECL1Q8N7X8 197 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 LRTM2Q8N967 370 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 BCL2L2Q92843 193 aaPredicted RBP11.86□□□□□ -0.51
LIG1-203ENST00000536218 WNT10AQ9GZT5 417 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 TYMSP04818 313 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 CRISP2P16562 243 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 BMP5P22003 454 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 AADACP22760 399 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 PSG4Q00888 419 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 TTTY12Q9BZ98 90 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 FBXL7Q9UJT9 491 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 RNF114Q9Y508 228 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 COL27A1Q8IZC6 1860 aaPredicted RBP11.86□□□□□ -0.51
LIG1-203ENST00000536218 DOCK11Q5JSL3 2073 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 ARHGAP21Q5T5U3 1957 aa11.86□□□□□ -0.51
LIG1-203ENST00000536218 SPAARA0A1B0GVQ0 90 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 F2Z2F3 143 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 ANGPTL7O43827 346 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 PSG1P11464 419 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 EGR1P18146 543 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 TNFSF4P23510 183 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 MDH2P40926 338 aaKnown RBP11.85□□□□□ -0.51
LIG1-203ENST00000536218 PSMB3P49720 205 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 TUSC5Q8IXB3 177 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 DEFB124Q8NES8 71 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 OR1F12Q8NHA8 337 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 SPIN2AQ99865 258 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 SPIN2BQ9BPZ2 258 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 B4GALT7Q9UBV7 327 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 HSPB7Q9UBY9 170 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 IL19Q9UHD0 177 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 YLPM1P49750 1951 aaKnown RBP11.85□□□□□ -0.51
LIG1-203ENST00000536218 IGLC2P0DOY2 106 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 IGLC3P0DOY3 106 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 CCL1P22362 96 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 CBLN1P23435 193 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 CTSSP25774 331 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 FOXG1P55316 489 aaPredicted RBP11.85□□□□□ -0.51
LIG1-203ENST00000536218 BATF2Q8N1L9 274 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 TMEM251Q8N6I4 163 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 CCDC71LQ8N9Z2 235 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 DEFB127Q9H1M4 99 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 C11orf1Q9H5F2 150 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 PTPRZ1P23471 2315 aaPredicted RBP11.85□□□□□ -0.51
LIG1-203ENST00000536218 DNPH1O43598 174 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 CCL2P13500 99 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 BAXQ07812 192 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 VASH2Q86V25 355 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 SGMS2Q8NHU3 365 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 ZNF586Q9NXT0 402 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 SVILO95425 2214 aa11.85□□□□□ -0.51
LIG1-203ENST00000536218 ZFHX2Q9C0A1 2572 aaPredicted RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 ZNF133P52736 654 aaPredicted RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 EIF3IQ13347 325 aaKnown RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 CPT1CQ8TCG5 803 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 ZNF430Q9H8G1 570 aaPredicted RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 SLC7A10Q9NS82 523 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 DMXL1Q9Y485 3027 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 SPRY1O43609 319 aaPredicted RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 SYNGR3O43761 229 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 COMPP49747 757 aaPredicted RBP11.84□□□□□ -0.51
LIG1-203ENST00000536218 PRDX4Q13162 271 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 C1orf174Q8IYL3 243 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 SLC25A22Q9H936 323 aa11.84□□□□□ -0.51
LIG1-203ENST00000536218 A0A0U1RQV5 110 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 MPPED1O15442 326 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 PMCHP20382 165 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 LHX2P50458 406 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 LCN2P80188 198 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 PDCD1Q15116 288 aa11.83□□□□□ -0.51
LIG1-203ENST00000536218 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms