RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 RPS16P62249 146 aaKnown RBP10.16□□□□□ -0.78
RTN3-207ENST00000536011 PITPNAQ00169 270 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 FABP5Q01469 135 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 C2orf76Q3KRA6 126 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 OR10J5Q8NHC4 309 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 RAB3CQ96E17 227 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 GFI1Q99684 422 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 RDH8Q9NYR8 311 aa10.16□□□□□ -0.78
RTN3-207ENST00000536011 NKX1-2Q9UD57 310 aaPredicted RBP10.16□□□□□ -0.78
RTN3-207ENST00000536011 ANKRD65E5RJM6 399 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 M0R1X1 148 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 FCN1O00602 326 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 CNIH1O95406 144 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 IGKV1-16P04430 117 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 HSPB1P04792 205 aaKnown RBP10.15□□□□□ -0.78
RTN3-207ENST00000536011 MYL9P24844 172 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 LGALS7P47929 136 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 CLDN12P56749 244 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 TBCEQ15813 527 aaPredicted RBP10.15□□□□□ -0.78
RTN3-207ENST00000536011 RTL8BQ17RB0 113 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 ZNF367Q7RTV3 350 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
RTN3-207ENST00000536011 LFNGQ8NES3 379 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 GRPEL2Q8TAA5 225 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 DLX4Q92988 240 aaPredicted RBP10.15□□□□□ -0.78
RTN3-207ENST00000536011 OR4C12Q96R67 309 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 CLCC1Q96S66 551 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 ELOVL1Q9BW60 279 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 SLC35D1Q9NTN3 355 aa10.15□□□□□ -0.78
RTN3-207ENST00000536011 TRAV1-2A0A0B4J238 106 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 A0A0G2JLM5 398 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 TMEM272A0A1B0GTI8 110 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 C13orf42A0A1B0GVH6 325 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 METTL21EPA6NDL7 271 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 BET1O15155 118 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 LDLRAD4O15165 306 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 SLC25A17O43808 307 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 TRGV3P03979 118 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 FCGR3AP08637 254 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 EGR2P11161 476 aaPredicted RBP10.14□□□□□ -0.79
RTN3-207ENST00000536011 TALDO1P37837 337 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 SLURP1P55000 103 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 FXYD3Q14802 87 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 ARL6IP1Q15041 203 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 MOGAT2Q3SYC2 334 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 PLAC9Q5JTB6 97 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 HES5Q5TA89 166 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 POC5Q8NA72 575 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 CASTOR1Q8WTX7 329 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 NRG4Q8WWG1 115 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 TMEM68Q96MH6 324 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 FAM103A1Q9BTL3 118 aaKnown RBP10.14□□□□□ -0.79
RTN3-207ENST00000536011 CABLES2Q9BTV7 478 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 ALX4Q9H161 411 aaPredicted RBP10.14□□□□□ -0.79
RTN3-207ENST00000536011 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 GAB2Q9UQC2 676 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 SORL1Q92673 2214 aa10.14□□□□□ -0.79
RTN3-207ENST00000536011 IGHV4OR15-8A0A075B7B6 117 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 A0A087WW49 117 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 IGKV1-6A0A0C4DH72 117 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 IGHV3-11P01762 117 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 RRASP10301 218 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 RAB6AP20340 208 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 ZP3P21754 424 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 MAP2K4P45985 399 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 OR10R2Q8NGX6 335 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 ADTRPQ96IZ2 230 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 HARBI1Q96MB7 349 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 MS4A10Q96PG2 267 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 GINS4Q9BRT9 223 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 RANGRFQ9HD47 186 aaPredicted RBP10.13□□□□□ -0.79
RTN3-207ENST00000536011 NDUFB11Q9NX14 153 aa10.13□□□□□ -0.79
RTN3-207ENST00000536011 RBM7Q9Y580 266 aaKnown RBP10.13□□□□□ -0.79
RTN3-207ENST00000536011 TRBV6-7A0A0A0MS04 114 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 IFITM5A6NNB3 132 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 PROP1O75360 226 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 GP9P14770 177 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 HIST1H1DP16402 221 aaKnown RBP10.12□□□□□ -0.79
RTN3-207ENST00000536011 GALP22466 123 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 AADACP22760 399 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 IZUMO2Q6UXV1 221 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 RHOVQ96L33 236 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 ASCL2Q99929 193 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 TPSG1Q9NRR2 321 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 STUB1Q9UNE7 303 aa10.12□□□□□ -0.79
RTN3-207ENST00000536011 A0A075B6Q4 140 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 C3orf84H3BNL1 204 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 MFNGO00587 321 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 SHOXO15266 292 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 CREBL2O60519 120 aaPredicted RBP10.11□□□□□ -0.79
RTN3-207ENST00000536011 SPNP16150 400 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 GNB3P16520 340 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 RAB3BP20337 219 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 ARFRP1Q13795 201 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 SRSF7Q16629 238 aaKnown RBP eCLIP10.11□□□□□ -0.79
RTN3-207ENST00000536011 IGSF11Q5DX21 431 aa10.11□□□□□ -0.79
RTN3-207ENST00000536011 ANKRD13BQ86YJ7 626 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms