RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 AJUBAQ96IF1 538 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 RTBDNQ9BSG5 229 aaPredicted RBP13.12□□□□□ -0.31
VAMP1-205ENST00000535927 C5orf66Q9H5L9 145 aa13.12□□□□□ -0.31
VAMP1-205ENST00000535927 LIN7CQ9NUP9 197 aaKnown RBP13.12□□□□□ -0.31
VAMP1-205ENST00000535927 FAM106CPP0CH98 169 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 CT45A6P0DMU7 189 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 CT45A5P0DMU8 189 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 CT45A7P0DMV0 189 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 ANXA3P12429 323 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 RPA2P15927 270 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 F2RP25116 425 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 DHODHQ02127 395 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 EBI3Q14213 229 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 RTL8BQ17RB0 113 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 BRD3OSQ6XYD6 125 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 LHFPL4Q7Z7J7 247 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 PDPNQ86YL7 162 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 CADM3Q8N126 398 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 TMEM86BQ8N661 226 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 OR5R1Q8NH85 324 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 NABP2Q9BQ15 211 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
VAMP1-205ENST00000535927 A0A1W2PPI3 338 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 FAM90A9PA6NNJ1 464 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 PRAF2O60831 178 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 ATG12O94817 140 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 H2AFB2P0C5Z0 115 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 SRD5A1P18405 259 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 LGALS7P47929 136 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 SRPXP78539 464 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 LRRC75BQ2VPJ9 315 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 RPL39P5Q59GN2 51 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
VAMP1-205ENST00000535927 OR8H1Q8NGG4 311 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 DDB2Q92466 427 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 SMR3AQ99954 134 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 OCEL1Q9H607 264 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 WASHC3Q9Y3C0 194 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 HILPDAQ9Y5L2 63 aa13.1□□□□□ -0.31
VAMP1-205ENST00000535927 SONP18583 2426 aaKnown RBP13.1□□□□□ -0.31
VAMP1-205ENST00000535927 A0A0A6YYJ9 748 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 TEX13DA0A0J9YY54 714 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-205ENST00000535927 A0A0U1RQK1 487 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 A0A1W2PRD5 423 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 A0A1W2PRF3 423 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 A0A1W2PRM7 423 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 PEX14O75381 377 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 DHFRP00374 187 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 RLN1P04808 185 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 LDLRAD2Q5SZI1 272 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 Q6YL49 198 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 LIAT1Q6ZQX7 453 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 MOB3BQ86TA1 216 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 OR4C13Q8NGP0 309 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 OSR1Q8TAX0 266 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-205ENST00000535927 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 C20orf85Q9H1P6 137 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 ZNRD1Q9P1U0 126 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 POMT1Q9Y6A1 747 aa13.09□□□□□ -0.31
VAMP1-205ENST00000535927 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 BTBD17A6NE02 478 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 H0Y980 276 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 H0YJW9 148 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 HPRT1P00492 218 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 IL5P05113 134 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 FAM157CP0CG43 387 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
VAMP1-205ENST00000535927 BAMBIQ13145 260 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 PHLDA2Q53GA4 152 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 C16orf82Q7Z2V1 217 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 TBC1D26Q86UD7 250 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 ZNF383Q8NA42 475 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 OR2T10Q8NGZ9 312 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 OR4S2Q8NH73 311 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 TCTEX1D2Q8WW35 142 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 CFHR4Q92496 578 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 FLYWCH2Q96CP2 140 aaKnown RBP13.08□□□□□ -0.32
VAMP1-205ENST00000535927 JMJD8Q96S16 334 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 MRPL20Q9BYC9 149 aaKnown RBP13.08□□□□□ -0.32
VAMP1-205ENST00000535927 NAA60Q9H7X0 242 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 NUDT15Q9NV35 164 aa13.08□□□□□ -0.32
VAMP1-205ENST00000535927 COL6A5A8TX70 2615 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 INMT-MINDY4F8WBC2 141 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 TIMM23O14925 209 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 ARPC1BO15143 372 aaKnown RBP13.07□□□□□ -0.32
VAMP1-205ENST00000535927 CRLF1O75462 422 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 MOSP00540 346 aa13.07□□□□□ -0.32
VAMP1-205ENST00000535927 HRASP01112 189 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms