RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 RCL1Q9Y2P8 373 aaKnown RBP3.94□□□□□ -1.78
CYCSP28-201ENST00000534284 POLDIP2Q9Y2S7 368 aa3.94□□□□□ -1.78
CYCSP28-201ENST00000534284 OR2W1Q9Y3N9 320 aa3.94□□□□□ -1.78
CYCSP28-201ENST00000534284 WSB1Q9Y6I7 421 aa3.94□□□□□ -1.78
CYCSP28-201ENST00000534284 SHANK1Q9Y566 2161 aa3.94□□□□□ -1.78
CYCSP28-201ENST00000534284 TNRC6AQ8NDV7 1962 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 IGKV1D-8A0A087WSZ0 117 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 IGHV3-15A0A0B4J1V0 119 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 IGKV1-12A0A0C4DH73 117 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 C5orf63A6NC05 138 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 INAFM1C9JVW0 142 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 J3QT63 122 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 DVL1O14640 695 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 AGPAT2O15120 278 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 KCNAB3O43448 404 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 NME2P1O60361 137 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SS18L1O75177 396 aaPredicted RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 RBMXL2O75526 392 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 TRAPPC6AO75865 159 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 IGKV1D-12P01611 117 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 MBP02144 154 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 CSN3P07498 182 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 CELA2AP08217 269 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 ACAA1P09110 424 aaPredicted RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 ZNF806P0C7X5 589 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 ACP1P24666 158 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 F2RP25116 425 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 ATP6V0CP27449 155 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 GNRHRP30968 328 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 RPL35P42766 123 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 NPBWR2P48146 333 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SULT1A1P50225 295 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 HLA-DRB3P79483 266 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 PRDX4Q13162 271 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 ATP6V1FQ16864 119 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SLC25A24Q6NUK1 477 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 ZNF880Q6PDB4 577 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 RBMS3Q6XE24 437 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 MEX3BQ6ZN04 569 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 YRDCQ86U90 279 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 RTN4RL2Q86UN3 420 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 C1orf174Q8IYL3 243 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SELENOHQ8IZQ5 122 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 TMEM252Q8N6L7 170 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 HSD17B11Q8NBQ5 300 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 OR56B2PQ8NGI1 322 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 AKR7LQ8NHP1 331 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 RNASE11Q8TAA1 199 aaKnown RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 CD300LFQ8TDQ1 290 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 HPSE2Q8WWQ2 592 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 APH1AQ96BI3 265 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 TVP23CQ96ET8 276 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 CIB3Q96Q77 187 aaPredicted RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 TP53RKQ96S44 253 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 CLCC1Q96S66 551 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SSX3Q99909 188 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 RTL8AQ9BWD3 113 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SMIM3Q9BZL3 60 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SPRY4Q9C004 299 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 GLRX2Q9NS18 164 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SLC7A10Q9NS82 523 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 IL19Q9UHD0 177 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 KLF13Q9Y2Y9 288 aaPredicted RBP3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 TIMM9Q9Y5J7 89 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 SDK1Q7Z5N4 2213 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 EML6Q6ZMW3 1958 aa3.93□□□□□ -1.78
CYCSP28-201ENST00000534284 C5orf42Q9H799 3197 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 C5orf49A4QMS7 147 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 NKX2-6A6NCS4 301 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 SLC22A20A6NK97 555 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 TMEM210A6NLX4 147 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 CD300LBA8K4G0 201 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 SSSCA1O60232 199 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 CLDN14O95500 239 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 OPN1MWP04001 364 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 LIPFP07098 398 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 OPN1MW2P0DN77 364 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 OPN1MW3P0DN78 364 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 IGHV4-30-4P0DP06 118 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 IRF2P14316 349 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 MYOD1P15172 320 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 KLK2P20151 261 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 NFYBP25208 207 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 S100A2P29034 98 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 OTX2P32243 289 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 HAAOP46952 286 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 UBE2KP61086 200 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 RPS18P62269 152 aaKnown RBP3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 ZXDAP98168 799 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 TGFBR3Q03167 851 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 COL10A1Q03692 680 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 IGFBP7Q16270 282 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 GABRA6Q16445 453 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 SP6Q3SY56 376 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 MORN5Q5VZ52 161 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 PCSK4Q6UW60 755 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 Q75L30 129 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 FAM58AQ8N1B3 248 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 GAPTQ8N292 157 aa3.92□□□□□ -1.78
CYCSP28-201ENST00000534284 THAP8Q8NA92 274 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms