RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 CLDN6P56747 220 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GNG3P63215 75 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SELENOWP63302 87 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SLC35B1P78383 322 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 H3F3AP84243 136 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 BATFQ16520 125 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 KRTAP27-1Q3LI81 207 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 PDZD11Q5EBL8 140 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 OR2T2Q6IF00 324 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TIFABQ6ZNK6 161 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GTSCR1Q86UQ5 136 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 UBALD2Q8IYN6 164 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ABHD12Q8N2K0 398 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 MAPK1IP1LQ8NDC0 245 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 OR52E4Q8NGH9 312 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF675Q8TD23 568 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SLC25A46Q96AG3 418 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SEH1LQ96EE3 360 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CCDC115Q96NT0 180 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TBX5Q99593 518 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 MRPL57Q9BQC6 102 aaKnown RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ZNF649Q9BS31 505 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CLN6Q9NWW5 311 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 BET1LQ9NYM9 111 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TRAPPC2LQ9UL33 140 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 STYXL1Q9Y6J8 313 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 USP34Q70CQ2 3546 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 PTPRZ1P23471 2315 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 IGHV3-16A0A0C4DH30 117 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 LOC100131303A0A0U1RQF7 123 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 A0A1B0GTH9 108 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM150BA6NC51 233 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 HIDE1A8MVS5 230 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SNRPGP15A8MWD9 76 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CCL21O00585 134 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 BCL2L11O43521 198 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 EEDO75530 441 aaKnown RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SCRG1O75711 98 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 IFNA1P01562 189 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 HBE1P02100 147 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 OPN1SWP03999 348 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CATP04040 527 aaKnown RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 LIPCP11150 499 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 MIPP30301 263 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 SNCAP37840 140 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 MDH2P40926 338 aaKnown RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GPR6P46095 362 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GABRA2P47869 451 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 DNASE1L1P49184 302 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CAV2P51636 162 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 POLR2HP52434 150 aaKnown RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 RAB38P57729 211 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ACVR1Q04771 509 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ST3GAL4Q11206 333 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 LY6DQ14210 128 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 FZD2Q14332 565 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TAL2Q16559 108 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 ACTL10Q5JWF8 245 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 C20orf196Q8IYI0 205 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 FAM24BQ8N5W8 94 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CHST4Q8NCG5 386 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 OR1N2Q8NGR9 330 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 OR2Y1Q8NGV0 311 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 OR6K2Q8NGY2 324 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GPR119Q8TDV5 335 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 C15orf40Q8WUR7 153 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 RASL10AQ92737 203 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 DYNLL2Q96FJ2 89 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 YPEL4Q96NS1 127 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 GPR82Q96P67 336 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CIB3Q96Q77 187 aaPredicted RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 CHCHD5Q9BSY4 110 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM27Q9HBJ8 222 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TAF9BQ9HBM6 251 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TMEM100Q9NV29 134 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 MRPL16Q9NX20 251 aaKnown RBP2.75□□□□□ -1.97
CSMD3-210ENST00000534172 RPS6KB2Q9UBS0 482 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 TNFSF18Q9UNG2 199 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 UBR2Q8IWV8 1755 aa2.75□□□□□ -1.97
CSMD3-210ENST00000534172 FBN2P35556 2912 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 IGSF9BQ9UPX0 1349 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 IGLV3-22A0A075B6J6 115 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 KLF18A0A0U1RQI7 1052 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 GGT3PA6NGU5 568 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 E9PLD3 99 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 LSM8O95777 96 aaKnown RBP2.74□□□□□ -1.97
CSMD3-210ENST00000534172 SEMG1P04279 462 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 TYMSP04818 313 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 SLC35G6P0C7Q6 338 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 TFPI2P48307 235 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 SULT1A1P50225 295 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 RUNX1Q01196 453 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 MLLT11Q13015 90 aaPredicted RBP2.74□□□□□ -1.97
CSMD3-210ENST00000534172 PRDX4Q13162 271 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 OR2F1Q13607 317 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 CCSMST1Q4G0I0 132 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 C9orf66Q5T8R8 295 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 TBPL2Q6SJ96 375 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 SLC25A26Q70HW3 274 aa2.74□□□□□ -1.97
CSMD3-210ENST00000534172 COX15Q7KZN9 410 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms