RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CD3GP09693 182 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 EGR2P11161 476 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 GADD45AP24522 165 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 MAP2K4P45985 399 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 RPL5P46777 297 aaKnown RBP9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 C19orf54Q5BKX5 351 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 UNQ5815/PRO19632Q6UWF5 114 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 PDPNQ86YL7 162 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 OR10J5Q8NHC4 309 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 DCUN1D4Q92564 292 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 TOLLIPQ9H0E2 274 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 SLA2Q9H6Q3 261 aa9.62□□□□□ -0.87
CAPRIN1-213ENST00000533562 TRAV1-2A0A0B4J238 106 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 IGKV1-6A0A0C4DH72 117 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 TMEM272A0A1B0GTI8 110 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 ARPC1BO15143 372 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 PROP1O75360 226 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 LY86O95711 162 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 IGKV1-16P04430 117 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 LGALS1P09382 135 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 LGALS7P47929 136 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 TBCEQ15813 527 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 HES5Q5TA89 166 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 ASPHD1Q5U4P2 390 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 ZNF367Q7RTV3 350 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 ZNF383Q8NA42 475 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 LFNGQ8NES3 379 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 ALX4Q9H161 411 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 GAB2Q9UQC2 676 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 U3KQK5 164 aa9.61□□□□□ -0.87
CAPRIN1-213ENST00000533562 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 METTL21EPA6NDL7 271 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 IFITM5A6NNB3 132 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 M0R1X1 148 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 BET1O15155 118 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 FABP7O15540 132 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 SAP30O75446 220 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 CNIH1O95406 144 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 DIRAS3O95661 229 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 CA2P00918 260 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 HSPB1P04792 205 aaKnown RBP9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 OR8U9P0C7N5 309 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 S100A1P23297 94 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 MYL9P24844 172 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 LINC00205P59089 165 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 TPPP2P59282 170 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 FXYD3Q14802 87 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 OR10R2Q8NGX6 335 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 CASTOR1Q8WTX7 329 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 ARPC1AQ92747 370 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 DLX4Q92988 240 aaPredicted RBP9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 CNBD2Q96M20 576 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 MS4A10Q96PG2 267 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 FAM103A1Q9BTL3 118 aaKnown RBP9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 KCNK7Q9Y2U2 307 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 SMAD5-AS1Q9Y6J3 95 aa9.6□□□□□ -0.87
CAPRIN1-213ENST00000533562 TRBV6-7A0A0A0MS04 114 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 SLC25A17O43808 307 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 FCGR3AP08637 254 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 GSTT2P0CG29 244 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 GSTT2BP0CG30 244 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 GNB3P16520 340 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 RAB6AP20340 208 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 GALP22466 123 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 TALDO1P37837 337 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 SLURP1P55000 103 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 ARL6IP1Q15041 203 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 IGSF11Q5DX21 431 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 IZUMO2Q6UXV1 221 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 RHOVQ96L33 236 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 TMEM68Q96MH6 324 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 GINS4Q9BRT9 223 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 TPSG1Q9NRR2 321 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 ZNF355PQ9NSJ1 428 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 NDUFB11Q9NX14 153 aa9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 RBM7Q9Y580 266 aaKnown RBP9.59□□□□□ -0.87
CAPRIN1-213ENST00000533562 A0A075B6Q4 140 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 IGHV4OR15-8A0A075B7B6 117 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 A0A087WW49 117 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 A0A0G2JLM5 398 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 TRDV1A0A1B0GX56 115 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 H3BUA1 57 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 IGHV3-11P01762 117 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 TRGV3P03979 118 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 RRASP10301 218 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 RAB3BP20337 219 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 PLA2G7Q13093 441 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 ARFRP1Q13795 201 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 SSX1Q16384 188 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 SRSF7Q16629 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 RTL8BQ17RB0 113 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 MOGAT2Q3SYC2 334 aa9.58□□□□□ -0.88
CAPRIN1-213ENST00000533562 ACSM6Q6P461 480 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms