RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 RHOGP84095 191 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 EWSR1Q01844 656 aaKnown RBP eCLIP8□□□□□ -1.13
CTNND1-235ENST00000533189 ATP5G2Q06055 141 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 CBX3Q13185 183 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 MOB1BQ7L9L4 216 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 FAM223AQ8IWN6 122 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 OR52B4Q8NGK2 314 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 AGMATQ9BSE5 352 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 FAAP24Q9BTP7 215 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 C11orf54Q9H0W9 315 aaPredicted RBP8□□□□□ -1.13
CTNND1-235ENST00000533189 TP53TG1Q9Y2A0 90 aa8□□□□□ -1.13
CTNND1-235ENST00000533189 A0A1W2PPK0 400 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 MSGN1A6NI15 193 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 EI24O14681 340 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 OGG1O15527 345 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 SPRY2O43597 315 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 RBMXL2O75526 392 aaKnown RBP7.99□□□□□ -1.13
CTNND1-235ENST00000533189 LINC00205P59089 165 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 ANKRD55Q3KP44 614 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 YIF1BQ5BJH7 314 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 OR2G6Q5TZ20 316 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 C1orf146Q5VVC0 180 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 ZNF880Q6PDB4 577 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 C6orf201Q7Z4U5 140 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 WFDC3Q8IUB2 231 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 TMEM217Q8N7C4 229 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 ADAD2Q8NCV1 583 aaKnown RBP7.99□□□□□ -1.13
CTNND1-235ENST00000533189 RHOXF1Q8NHV9 184 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 HARBI1Q96MB7 349 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 FGF20Q9NP95 211 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-235ENST00000533189 AKIP1Q9NQ31 210 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 MRPS18AQ9NVS2 196 aaKnown RBP7.99□□□□□ -1.13
CTNND1-235ENST00000533189 BABAM2Q9NXR7 383 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 OR1A1Q9P1Q5 309 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 GHRLQ9UBU3 117 aa7.99□□□□□ -1.13
CTNND1-235ENST00000533189 ZNF230Q9UIE0 474 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-235ENST00000533189 TRBV5-7A0A0A0MS05 114 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.98□□□□□ -1.13
CTNND1-235ENST00000533189 M0R1X1 148 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 PROP1O75360 226 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 NAPSAO96009 420 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 IGLV2-23P01705 113 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 CRYGBP07316 175 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 ATF4P18848 351 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-235ENST00000533189 EDN2P20800 178 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 MAP2K4P45985 399 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 ETV1P50549 477 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 APOC4P55056 127 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 TNXAQ16473 311 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 FAM209BQ5JX69 171 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 ZNF57Q68EA5 555 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-235ENST00000533189 Q6ZWC4 215 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 NKAIN3Q8N8D7 197 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 KCNG3Q8TAE7 436 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 PHLDA1Q8WV24 401 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-235ENST00000533189 PTX4Q96A99 478 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 UQCC2Q9BRT2 126 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 SELENOKQ9Y6D0 94 aa7.98□□□□□ -1.13
CTNND1-235ENST00000533189 PPP5D1E7EU14 171 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 LGALS9O00182 355 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 DYNC1I1O14576 645 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 SHOXO15266 292 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 GGCTO75223 188 aaKnown RBP7.97□□□□□ -1.13
CTNND1-235ENST00000533189 SCAF4O95104 1147 aaKnown RBP7.97□□□□□ -1.13
CTNND1-235ENST00000533189 PRH1P02810 166 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 UBBP0CG47 229 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 DCKP27707 260 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 RPS11P62280 158 aaKnown RBP eCLIP7.97□□□□□ -1.13
CTNND1-235ENST00000533189 HLA-DRB3P79483 266 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 DEFB135Q30KP9 77 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 TM4SF20Q53R12 229 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 GLT8D1Q68CQ7 371 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 TMEM61Q8N0U2 210 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-235ENST00000533189 CACNG8Q8WXS5 425 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 SLC29A1Q99808 456 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 TMEM59Q9BXS4 323 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 RIMS4Q9H426 269 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-235ENST00000533189 PLEKHJ1Q9NW61 149 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 MGAT4AQ9UM21 535 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 EXOSC1Q9Y3B2 195 aaKnown RBP7.97□□□□□ -1.13
CTNND1-235ENST00000533189 MUC4Q99102 2169 aa7.97□□□□□ -1.13
CTNND1-235ENST00000533189 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 UBE2CO00762 179 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 OR2C1O95371 312 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 LALBAP00709 142 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 HLA-AP01891 365 aaKnown RBP7.96□□□□□ -1.14
CTNND1-235ENST00000533189 MYL12AP19105 171 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 CBLN1P23435 193 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 RPS27AP62979 156 aaKnown RBP7.96□□□□□ -1.14
CTNND1-235ENST00000533189 TAGLNQ01995 201 aaKnown RBP7.96□□□□□ -1.14
CTNND1-235ENST00000533189 RTL8BQ17RB0 113 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 VMA21Q3ZAQ7 101 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 TMEM177Q53S58 311 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 OR10K2Q6IF99 312 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 ZFP41Q8N8Y5 198 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 NECAP1Q8NC96 275 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 SRSF12Q8WXF0 261 aaKnown RBP7.96□□□□□ -1.14
CTNND1-235ENST00000533189 ACOT12Q8WYK0 555 aa7.96□□□□□ -1.14
CTNND1-235ENST00000533189 TRBV6-6A0A0A6YYG2 114 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms