RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 PDZD9Q8IXQ8 264 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 OR8H3Q8N146 312 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 PIP4P2Q8N4L2 257 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 NANPQ8TBE9 248 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 GLYATL2Q8WU03 294 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 RPEQ96AT9 228 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 NABP2Q9BQ15 211 aa11.4□□□□□ -0.58
HIF3A-215ENST00000533145 GPN1Q9HCN4 374 aaPredicted RBP11.4□□□□□ -0.58
HIF3A-215ENST00000533145 A0A0B4J2A0 478 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 IGHV1-3A0A0C4DH29 117 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 RBFOX2O43251 390 aaKnown RBP eCLIP11.39□□□□□ -0.59
HIF3A-215ENST00000533145 IFNA2P01563 188 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 IGHV4-38-2P0DP08 117 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 ANXA3P12429 323 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 UCP1P25874 307 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 SAA4P35542 130 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 KIR2DS2P43631 304 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 BRWD1-AS2P59051 145 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 HABP2Q14520 560 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-215ENST00000533145 TMEM187Q14656 261 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 C4orf46Q504U0 113 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 CCDC144NLQ6NUI1 221 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 ZNF383Q8NA42 475 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 CD300LFQ8TDQ1 290 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 ZNF431Q8TF32 576 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-215ENST00000533145 MITD1Q8WV92 249 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 TP53RKQ96S44 253 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 GPHA2Q96T91 129 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 BEX2Q9BXY8 128 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 MEGF9Q9H1U4 602 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 BEX1Q9HBH7 125 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 LIN7CQ9NUP9 197 aaKnown RBP11.39□□□□□ -0.59
HIF3A-215ENST00000533145 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 SHPKQ9UHJ6 478 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 PRELID3BQ9Y3B1 194 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 AKAP9Q99996 3911 aa11.39□□□□□ -0.59
HIF3A-215ENST00000533145 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
HIF3A-215ENST00000533145 A0A0A6YYJ9 748 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 A0A1W2PPI3 338 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 A0A1W2PRD5 423 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 A0A1W2PRF3 423 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 A0A1W2PRM7 423 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 CDS2O95674 445 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 HLA-AP01891 365 aaKnown RBP11.38□□□□□ -0.59
HIF3A-215ENST00000533145 OR5AC1P0C628 307 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 RRASP10301 218 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 RPA2P15927 270 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 VAMP1P23763 118 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 MC5RP33032 325 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 LINC00205P59089 165 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 ZNF585BQ52M93 769 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 C9orf139Q6ZV77 190 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 LRTM2Q8N967 370 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 DRAXINQ8NBI3 349 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-215ENST00000533145 OR51H1Q8NH63 302 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 TCTEX1D2Q8WW35 142 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 TMEM56Q96MV1 263 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 SEC22CQ9BRL7 303 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 MRPL20Q9BYC9 149 aaKnown RBP11.38□□□□□ -0.59
HIF3A-215ENST00000533145 TMEM222Q9H0R3 208 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 NUP50Q9UKX7 468 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 TMEM56-RWDD3S4R434 201 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 F8P00451 2351 aa11.38□□□□□ -0.59
HIF3A-215ENST00000533145 FLNAP21333 2647 aaKnown RBP11.37□□□□□ -0.59
HIF3A-215ENST00000533145 PIGBOS1A0A0B4J2F0 54 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 H0YJW9 148 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-215ENST00000533145 CD99P14209 185 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 CD1BP29016 333 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 DHRS7BQ6IAN0 325 aaPredicted RBP11.37□□□□□ -0.59
HIF3A-215ENST00000533145 LIAT1Q6ZQX7 453 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 SPAG16Q8N0X2 631 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 DYNAPQ8N1N2 210 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 OR52B4Q8NGK2 314 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 IL22RA2Q969J5 263 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 ALG5Q9Y673 324 aa11.37□□□□□ -0.59
HIF3A-215ENST00000533145 CSPG4Q6UVK1 2322 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 A8MV72 311 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-215ENST00000533145 HPRT1P00492 218 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 APOA2P02652 100 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 REG1BP48304 166 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 DYNLT3P51808 116 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 SRPXP78539 464 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 SLC9A3R2Q15599 337 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 SSX2Q16385 188 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 ANKRD55Q3KP44 614 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 SP6Q3SY56 376 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 RUSC1-AS1Q66K80 236 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 THNSL2Q86YJ6 484 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 PDPNQ86YL7 162 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 LGI3Q8N145 548 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
HIF3A-215ENST00000533145 COQ8AQ8NI60 647 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 C17orf50Q8WW18 174 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 CFHR4Q92496 578 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 PHB2Q99623 299 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 RNF5Q99942 180 aa11.36□□□□□ -0.59
HIF3A-215ENST00000533145 OR51J1Q9H342 316 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms