RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, human

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-222	ENST00000532504	FBXL17	Q9UF56	701 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504	RNF24	Q9Y225	148 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504	CD24	P25063	80 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504	TIGIT	Q495A1	244 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504	PRSS54	Q6PEW0	395 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504	KCNIP4	Q6PIL6	250 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504	WSB1	Q9Y6I7	421 aa		13.24	□□□□□ -0.29
PPFIA1-222	ENST00000532504		A0A1B0GU03	582 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	MAPK1IP1L	Q8NDC0	245 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	MARC2	Q969Z3	335 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ZNF524	Q96C55	264 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	PRELID1	Q9Y255	219 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	IGKV1D-33	P01593	117 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	IGKV1-33	P01594	117 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	USF1	P22415	310 aa	Predicted RBP	13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	PLAUR	Q03405	335 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	OR4C13	Q8NGP0	309 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	TMEM140	Q9NV12	185 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504		E7EQL1	145 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	MFNG	O00587	321 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	TNFSF13	O75888	250 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	IZUMO4	Q1ZYL8	232 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	MBNL2	Q5VZF2	373 aa	Known RBP	13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	KDF1	Q8NAX2	398 aa	Predicted RBP	13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	PLPPR1	Q8TBJ4	325 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ST8SIA2	Q92186	375 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	CD37	P11049	281 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	GUCA2B	Q16661	112 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	DRAM1	Q8N682	238 aa		13.23	□□□□□ -0.29
PPFIA1-222	ENST00000532504	TRAV40	A0A0B4J280	105 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504		J3KRW8	73 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	LILRA1	O75019	489 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	SNRPC	P09234	159 aa	Known RBP	13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	HTN1	P15515	57 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	GZMK	P49863	264 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ADIPOQ	Q15848	244 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	FGFRL1	Q8N441	504 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	S1PR2	O95136	353 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	SLC25A5	P05141	298 aa	Known RBP	13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	FXYD3	Q14802	87 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ZNF818P	Q6ZRF7	136 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ZNF525	Q8N782	197 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	METRN	Q9UJH8	293 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	SNAPIN	O95295	136 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	BTNL8	Q6UX41	500 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	OR4X1	Q8NH49	305 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ASB13	Q8WXK3	278 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	LINC00312	Q9Y6C7	94 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	IGHV3-35	A0A0C4DH35	117 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	S100A4	P26447	101 aa	Known RBP	13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	SLC24A4	Q8NFF2	622 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504	LINC00052	Q96N35	136 aa		13.22	□□□□□ -0.29
PPFIA1-222	ENST00000532504		H0Y980	276 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	TM4SF5	O14894	197 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	OR2A4	O95047	310 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	CDS2	O95674	445 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	CEACAM8	P31997	349 aa	Predicted RBP	13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	OR2A7	Q96R45	310 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	SPP1	P10451	314 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	MEF2C	Q06413	473 aa	Predicted RBP	13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	FAM90A1	Q86YD7	464 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	OR1L4	Q8NGR5	311 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	FBXL15	Q9H469	300 aa		13.21	□□□□□ -0.29
PPFIA1-222	ENST00000532504	ZNF727	A8MUV8	499 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	COL8A1	P27658	744 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	SSX7	Q7RTT5	188 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	DOPEY2	Q9Y3R5	2298 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	MARCH11	A6NNE9	402 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	OR10G4	Q8NGN3	311 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	OR10G9	Q8NGN4	311 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	OR10G7	Q8NGN6	311 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	GSX2	Q9BZM3	304 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	NAGK	Q9UJ70	344 aa		13.21	□□□□□ -0.3
PPFIA1-222	ENST00000532504	DENND4C	Q5VZ89	1909 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	CXCL3	P19876	107 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	TAGLN2	P37802	199 aa	Known RBP	13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	PLSCR3	Q9NRY6	295 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	CNN1	P51911	297 aa	Known RBP	13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	DSCR9	P59020	149 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	TMEM222	Q9H0R3	208 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	PTPN13	Q12923	2485 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504		A6NNC1	897 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	IGHV3-48	P01763	117 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	PF4	P02776	101 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	VSIG10L2	P0DP72	767 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	COL8A2	P25067	703 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	KIAA0141	Q14154	515 aa	Predicted RBP	13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	ATP6V1F	Q16864	119 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	DUX5	Q96PT3	197 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	SLC45A2	Q9UMX9	530 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	GPR132	Q9UNW8	380 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	INHBB	P09529	407 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	FAM78B	Q5VT40	261 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	NUP37	Q8NFH4	326 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	BPESC1	Q9GZL8	116 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	URGCP-MRPS24	S4R325	110 aa		13.2	□□□□□ -0.3
PPFIA1-222	ENST00000532504	CLN5	O75503	358 aa		13.19	□□□□□ -0.3
PPFIA1-222	ENST00000532504	CDC34	P49427	236 aa	Predicted RBP	13.19	□□□□□ -0.3
PPFIA1-222	ENST00000532504	FGF8	P55075	233 aa	Predicted RBP	13.19	□□□□□ -0.3

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