RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 HSD17B10Q99714 261 aaKnown RBP10.09□□□□□ -0.79
COPB1-208ENST00000532088 COPZ2Q9P299 210 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 TBC1D24Q9ULP9 559 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 HIVEP2P31629 2446 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 F8P00451 2351 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 CELSR1Q9NYQ6 3014 aa10.09□□□□□ -0.79
COPB1-208ENST00000532088 IGHV1-3A0A0C4DH29 117 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 A0A1W2PPI3 338 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 INAFM1C9JVW0 142 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 PROP1O75360 226 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 CTSDP07339 412 aaPredicted RBP10.08□□□□□ -0.8
COPB1-208ENST00000532088 FAM157CP0CG43 387 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 SLC6A1P30531 599 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 BRS3P32247 399 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 BTCP35070 178 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 THBS3P49746 956 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 SSX2Q16385 188 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 THNSL2Q86YJ6 484 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 TMEM86BQ8N661 226 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 OR5AN1Q8NGI8 311 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 NABP2Q9BQ15 211 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 CCL28Q9NRJ3 127 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 RNF150Q9ULK6 438 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 GPR132Q9UNW8 380 aa10.08□□□□□ -0.8
COPB1-208ENST00000532088 SCO2A0A1W2PP80 73 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 FAM90A9PA6NNJ1 464 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 RNF212BA8MTL3 300 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 B3GALNT1O75752 331 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 NDUFB6O95139 128 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 CT45A6P0DMU7 189 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 CT45A5P0DMU8 189 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 CT45A7P0DMV0 189 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 RRASP10301 218 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 PGAM2P15259 253 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 CD1BP29016 333 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 MC5RP33032 325 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 DUTP33316 252 aaKnown RBP10.07□□□□□ -0.8
COPB1-208ENST00000532088 CATR1Q13166 79 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 DCTN2Q13561 401 aaKnown RBP10.07□□□□□ -0.8
COPB1-208ENST00000532088 DIAPH2-AS1Q14236 149 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 LRRC75BQ2VPJ9 315 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 DEFB112Q30KQ8 113 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 RPL39P5Q59GN2 51 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 Q6YL49 198 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 BCL6BQ8N143 479 aaPredicted RBP10.07□□□□□ -0.8
COPB1-208ENST00000532088 DYNAPQ8N1N2 210 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 TCTEX1D1Q8N7M0 179 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 CCDC71LQ8N9Z2 235 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 CFHR4Q92496 578 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 C5orf30Q96GV9 206 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 FAM212BQ9NTI7 297 aaPredicted RBP10.07□□□□□ -0.8
COPB1-208ENST00000532088 HILPDAQ9Y5L2 63 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 SVEP1Q4LDE5 3571 aa10.07□□□□□ -0.8
COPB1-208ENST00000532088 NAV3Q8IVL0 2385 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 A0A0A6YYJ9 748 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 H0YJW9 148 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 M0R1X1 148 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 RAB13P51153 203 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 EBI3Q14213 229 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 KCTD9Q7L273 389 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 PDPNQ86YL7 162 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 OR5R1Q8NH85 324 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 MARCH1Q8TCQ1 289 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 DDB2Q92466 427 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 RNF5Q99942 180 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 MRPL20Q9BYC9 149 aaKnown RBP10.06□□□□□ -0.8
COPB1-208ENST00000532088 DPAGT1Q9H3H5 408 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 SLC2A9Q9NRM0 540 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 C14orf166Q9Y224 244 aaKnown RBP10.06□□□□□ -0.8
COPB1-208ENST00000532088 PRELID3BQ9Y3B1 194 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 POMT1Q9Y6A1 747 aa10.06□□□□□ -0.8
COPB1-208ENST00000532088 MAST4O15021 2626 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 LINC00854A0A1B0GVQ3 168 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 TIMM23O14925 209 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 RBFOX2O43251 390 aaKnown RBP eCLIP10.05□□□□□ -0.8
COPB1-208ENST00000532088 PGLYRP1O75594 196 aaPredicted RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 APOA2P02652 100 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 FAM106CPP0CH98 169 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 REG1BP48304 166 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 UBE2MP61081 183 aaKnown RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 ABCA11PQ4W5N1 156 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 DHRS7BQ6IAN0 325 aaPredicted RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 C11orf88Q6PI97 169 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 RBMS3Q6XE24 437 aaKnown RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 Q71RC1 249 aaPredicted RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 WFDC3Q8IUB2 231 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 POC5Q8NA72 575 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 DUSP18Q8NEJ0 188 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 CD300LFQ8TDQ1 290 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 SSMEM1Q8WWF3 244 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 ZNF48Q96MX3 618 aaPredicted RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 RTBDNQ9BSG5 229 aaPredicted RBP10.05□□□□□ -0.8
COPB1-208ENST00000532088 C5orf66Q9H5L9 145 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 PITPNC1Q9UKF7 332 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 VSIG4Q9Y279 399 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms