RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 SCN3BQ9NY72 215 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 PIPOXQ9P0Z9 390 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 RAB26Q9ULW5 256 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 TPRKBQ9Y3C4 175 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
USF1-210ENST00000531842 CXorf65A6NEN9 183 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 FOXI3A8MTJ6 420 aaPredicted RBP6.77□□□□□ -1.33
USF1-210ENST00000531842 RRHO14718 337 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 RAB29O14966 203 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 ARPC1BO15143 372 aaKnown RBP6.77□□□□□ -1.33
USF1-210ENST00000531842 SLC22A1O15245 554 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 DENRO43583 198 aaKnown RBP6.77□□□□□ -1.33
USF1-210ENST00000531842 CA2P00918 260 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 UBBP0CG47 229 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 APELAP0DMC3 54 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 SRMP19623 302 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.33
USF1-210ENST00000531842 MLLT11Q13015 90 aaPredicted RBP6.77□□□□□ -1.33
USF1-210ENST00000531842 C6orf201Q7Z4U5 140 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 CEACAM19Q7Z692 300 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 GTSCR1Q86UQ5 136 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 NR2C2APQ86WQ0 139 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 MS4A15Q8N5U1 240 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 GRPEL2Q8TAA5 225 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 IL17DQ8TAD2 202 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 PHYHIPQ92561 330 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 MGLLQ99685 303 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 SULT4A1Q9BR01 284 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 NICN1Q9BSH3 213 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 SRD5A3Q9H8P0 318 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 ACOT13Q9NPJ3 140 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 RNF150Q9ULK6 438 aa6.77□□□□□ -1.33
USF1-210ENST00000531842 DNAH6Q9C0G6 4158 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 ZNF785A8K8V0 405 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 TMEM14DPA8MWL7 114 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 HSMCR30P0CW71 290 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 CT45A6P0DMU7 189 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 CT45A5P0DMU8 189 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 CT45A7P0DMV0 189 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 HTR2CP28335 458 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 MC5RP33032 325 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 SSBP2P81877 361 aaPredicted RBP6.76□□□□□ -1.33
USF1-210ENST00000531842 HMGN3Q15651 99 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 TBCEQ15813 527 aaPredicted RBP6.76□□□□□ -1.33
USF1-210ENST00000531842 RBM48Q5RL73 367 aaKnown RBP6.76□□□□□ -1.33
USF1-210ENST00000531842 LY6G6FQ5SQ64 297 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 GLT8D1Q68CQ7 371 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 FAM71F2Q6NXP2 309 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 TCTEX1D1Q8N7M0 179 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 DRAXINQ8NBI3 349 aaPredicted RBP6.76□□□□□ -1.33
USF1-210ENST00000531842 NEURL2Q9BR09 285 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 TMEM59Q9BXS4 323 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 IFI27L2Q9H2X8 130 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 PLEKHJ1Q9NW61 149 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 SLC23A1Q9UHI7 598 aa6.76□□□□□ -1.33
USF1-210ENST00000531842 AK6Q9Y3D8 172 aaKnown RBP6.76□□□□□ -1.33
USF1-210ENST00000531842 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 OR5H14A6NHG9 310 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 H0Y980 276 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 RBBP9O75884 186 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 CEACAM6P40199 344 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 HSPA13P48723 471 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 TMEM50BP56557 158 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 RPS27AP62979 156 aaKnown RBP6.75□□□□□ -1.33
USF1-210ENST00000531842 PJVKQ0ZLH3 352 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
USF1-210ENST00000531842 HSD17B12Q53GQ0 312 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 PYHIN1Q6K0P9 492 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 CD200R1LQ6Q8B3 271 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 SPARTQ8N0X7 666 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 KCNG3Q8TAE7 436 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 UFD1Q92890 307 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 ABHD14BQ96IU4 210 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 OVOL2Q9BRP0 275 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 TM2D1Q9BX74 207 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 CCDC90BQ9GZT6 254 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 RIMS4Q9H426 269 aaPredicted RBP6.75□□□□□ -1.33
USF1-210ENST00000531842 RANGRFQ9HD47 186 aaPredicted RBP6.75□□□□□ -1.33
USF1-210ENST00000531842 METTL1Q9UBP6 276 aaKnown RBP6.75□□□□□ -1.33
USF1-210ENST00000531842 WASHC3Q9Y3C0 194 aa6.75□□□□□ -1.33
USF1-210ENST00000531842 C13orf42A0A1B0GVH6 325 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 OR11H12B2RN74 326 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 H0YJW9 148 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 CNIH1O95406 144 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 TFAP2AP05549 437 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 ZBTB25P24278 435 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
USF1-210ENST00000531842 CLDN12P56749 244 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 OR10A3P58181 314 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 RPS16P62249 146 aaKnown RBP6.74□□□□□ -1.33
USF1-210ENST00000531842 PRR20EP86478 221 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 PRR20CP86479 221 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 PRR20DP86480 221 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 PRR20BP86481 221 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 PRR20AP86496 221 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 PSG5Q15238 335 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 P2RY14Q15391 338 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 AKIRIN2Q53H80 203 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 UBE2UQ5VVX9 321 aa6.74□□□□□ -1.33
USF1-210ENST00000531842 LCN12Q6JVE5 192 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms