RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 OR52B4Q8NGK2 314 aa15.4■□□□□ 0.06
SMPD1-205ENST00000531303 C22orf15Q8WYQ4 148 aa15.4■□□□□ 0.06
SMPD1-205ENST00000531303 AJUBAQ96IF1 538 aa15.4■□□□□ 0.06
SMPD1-205ENST00000531303 MS4A7Q9GZW8 240 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-205ENST00000531303 NAA60Q9H7X0 242 aa15.4■□□□□ 0.06
SMPD1-205ENST00000531303 PRR13Q9NZ81 148 aa15.4■□□□□ 0.06
SMPD1-205ENST00000531303 NUP50Q9UKX7 468 aa15.4■□□□□ 0.06
SMPD1-205ENST00000531303 HIVEP1P15822 2718 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 A0A0U1RQK1 487 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 CRYM-AS1A6NIL9 109 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 RNF212BA8MTL3 300 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 DHFRP00374 187 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 OR4E1P0C645 316 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 CATR1Q13166 79 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 ZNF66Q6ZN08 573 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 BCL6BQ8N143 479 aaPredicted RBP15.39■□□□□ 0.05
SMPD1-205ENST00000531303 ZNF383Q8NA42 475 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 CASTOR1Q8WTX7 329 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 MALSU1Q96EH3 234 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 NABP2Q9BQ15 211 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 FAM96BQ9Y3D0 163 aa15.39■□□□□ 0.05
SMPD1-205ENST00000531303 SVEP1Q4LDE5 3571 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 IGHV1-3A0A0C4DH29 117 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 C3orf85A0A1B0GTC6 90 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 FSHBP01225 129 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 OR5AC1P0C628 307 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 FOSL1P15407 271 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 F2RP25116 425 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 SRP14P37108 136 aaKnown RBP15.38■□□□□ 0.05
SMPD1-205ENST00000531303 THBS3P49746 956 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 SUPT4H1P63272 117 aaKnown RBP15.38■□□□□ 0.05
SMPD1-205ENST00000531303 FAM71F2Q6NXP2 309 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 TP53RKQ96S44 253 aa15.38■□□□□ 0.05
SMPD1-205ENST00000531303 GSX1Q9H4S2 264 aaPredicted RBP15.38■□□□□ 0.05
SMPD1-205ENST00000531303 H7C2Y5 167 aa15.37■□□□□ 0.05
SMPD1-205ENST00000531303 TIMM23O14925 209 aa15.37■□□□□ 0.05
SMPD1-205ENST00000531303 FCGR3BO75015 233 aa15.37■□□□□ 0.05
SMPD1-205ENST00000531303 HLA-AP01891 365 aaKnown RBP15.37■□□□□ 0.05
SMPD1-205ENST00000531303 ZNF816Q0VGE8 651 aaPredicted RBP15.37■□□□□ 0.05
SMPD1-205ENST00000531303 ADTRPQ96IZ2 230 aa15.37■□□□□ 0.05
SMPD1-205ENST00000531303 KCNIP3Q9Y2W7 256 aa15.37■□□□□ 0.05
SMPD1-205ENST00000531303 PRELID3BQ9Y3B1 194 aa15.37■□□□□ 0.05
SMPD1-205ENST00000531303 A0A1W2PPI3 338 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 C9orf170A2RU37 121 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 SFT2D2O95562 160 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 CD24P25063 80 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 MECP2P51608 486 aaKnown RBP15.36■□□□□ 0.05
SMPD1-205ENST00000531303 RAG2P55895 527 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 UBE2MP61081 183 aaKnown RBP15.36■□□□□ 0.05
SMPD1-205ENST00000531303 DHODHQ02127 395 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 CBX3Q13185 183 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 DHRS2Q13268 280 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 TATDN3Q17R31 274 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 LYG2Q86SG7 212 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 SPAG16Q8N0X2 631 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 ALX4Q9H161 411 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-205ENST00000531303 LIN7CQ9NUP9 197 aaKnown RBP15.36■□□□□ 0.05
SMPD1-205ENST00000531303 F8P00451 2351 aa15.36■□□□□ 0.05
SMPD1-205ENST00000531303 HIVEP2P31629 2446 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 A0A0B4J293 547 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 MDFIC2A0A1B0GVS7 189 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 H0YJW9 148 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 TXNL1O43396 289 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 RAMP3O60896 148 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 IFNA2P01563 188 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 APOA2P02652 100 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 RAB13P51153 203 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 BRWD1-AS2P59051 145 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 CCDC144NLQ6NUI1 221 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 C11orf88Q6PI97 169 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 OR8H3Q8N146 312 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 DDB2Q92466 427 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 SLC35D1Q9NTN3 355 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 ALG5Q9Y673 324 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 NAV3Q8IVL0 2385 aa15.35■□□□□ 0.05
SMPD1-205ENST00000531303 OOSP1A8MZH6 123 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 H0Y980 276 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 IL5P05113 134 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 ANXA3P12429 323 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 HNF1AP20823 631 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 LIN54Q6MZP7 749 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 TEX29Q8N6K0 151 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 UXS1Q8NBZ7 420 aa15.34■□□□□ 0.05
SMPD1-205ENST00000531303 GPN1Q9HCN4 374 aaPredicted RBP15.34■□□□□ 0.05
SMPD1-205ENST00000531303 A0A0A6YYJ9 748 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 CRYZL1O95825 349 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 SERPINE2P07093 398 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 LPAR6P43657 344 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 BPIFB3P59826 476 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 RTL8BQ17RB0 113 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 OR5AN1Q8NGI8 311 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 ZNF431Q8TF32 576 aaPredicted RBP15.33■□□□□ 0.05
SMPD1-205ENST00000531303 GLYATL2Q8WU03 294 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 WASHC3Q9Y3C0 194 aa15.33■□□□□ 0.05
SMPD1-205ENST00000531303 hCG_2014768A0A024R1R8 64 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 PRAF2O60831 178 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 FBP1P09467 338 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 RPA2P15927 270 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 HNF4GQ14541 408 aa15.33■□□□□ 0.04
SMPD1-205ENST00000531303 TMEM187Q14656 261 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms