RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 THBS3P49746 956 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 ARPC4P59998 168 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 RPS16P62249 146 aaKnown RBP13.24□□□□□ -0.29
SF3B2-209ENST00000530322 CFHR3Q02985 330 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 KHDC1LQ5JSQ8 128 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 ZNF645Q8N7E2 425 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 FLYWCH2Q96CP2 140 aaKnown RBP13.24□□□□□ -0.29
SF3B2-209ENST00000530322 OR51J1Q9H342 316 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
SF3B2-209ENST00000530322 MEIS3P1A6NDR6 274 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 LINC00473A8K010 186 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 ATP6V0E1O15342 81 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 FCER2P06734 321 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 DUTP33316 252 aaKnown RBP13.23□□□□□ -0.29
SF3B2-209ENST00000530322 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
SF3B2-209ENST00000530322 PSG5Q15238 335 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 DDB2Q92466 427 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 TSNAXQ99598 290 aaKnown RBP13.23□□□□□ -0.29
SF3B2-209ENST00000530322 NECAP2Q9NVZ3 263 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
SF3B2-209ENST00000530322 FCN1O00602 326 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 HPGDSO60760 199 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 SLC22A5O76082 557 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 SPDEFO95238 335 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 IGLV2-14P01704 120 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 ZNF182P17025 639 aaPredicted RBP13.22□□□□□ -0.29
SF3B2-209ENST00000530322 ELK1P19419 428 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 VDAC1P21796 283 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 RPL23AP62750 156 aaKnown RBP13.22□□□□□ -0.29
SF3B2-209ENST00000530322 CX3CL1P78423 397 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 NDPQ00604 133 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 PLGLAQ15195 96 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 BVESQ8NE79 360 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 OR5AP2Q8NGF4 316 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 ADTRPQ96IZ2 230 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 IFT46Q9NQC8 304 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 PARP11Q9NR21 331 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 ZFP57Q9NU63 452 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 METTL1Q9UBP6 276 aaKnown RBP13.22□□□□□ -0.29
SF3B2-209ENST00000530322 NOTCH1P46531 2555 aa13.22□□□□□ -0.29
SF3B2-209ENST00000530322 IGLV2-23P01705 113 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 IGHG4P01861 327 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 OR5H8P0DN80 308 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 RRASP10301 218 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 PF4V1P10720 104 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 PPIFP30405 207 aaKnown RBP13.21□□□□□ -0.29
SF3B2-209ENST00000530322 FCGR2CP31995 323 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 PRSS3P35030 304 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 LGALS7P47929 136 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 FOXE3Q13461 319 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 SPCS2Q15005 226 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 RTL8BQ17RB0 113 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 TMEM177Q53S58 311 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 ZNF660Q6AZW8 331 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-209ENST00000530322 MZT2AQ6P582 158 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 CLVS1Q8IUQ0 354 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-209ENST00000530322 RNF152Q8N8N0 203 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 AP3S1Q92572 193 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 RBMX2Q9Y388 322 aaKnown RBP13.21□□□□□ -0.29
SF3B2-209ENST00000530322 FBXO7Q9Y3I1 522 aa13.21□□□□□ -0.29
SF3B2-209ENST00000530322 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 G3V318 75 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 SLC25A17O43808 307 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 RPLP1P05386 114 aaKnown RBP13.2□□□□□ -0.3
SF3B2-209ENST00000530322 ELANEP08246 267 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 EGR2P11161 476 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-209ENST00000530322 NAT1P18440 290 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 AADACP22760 399 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
SF3B2-209ENST00000530322 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-209ENST00000530322 CBX3Q13185 183 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 CDK10Q15131 360 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 C19orf54Q5BKX5 351 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 CXorf66Q5JRM2 361 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-209ENST00000530322 LCNL1Q6ZST4 164 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 C18orf65Q6ZTR6 163 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 RAB2BQ8WUD1 216 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 HARBI1Q96MB7 349 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 CLCC1Q96S66 551 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 WSB1Q9Y6I7 421 aa13.2□□□□□ -0.3
SF3B2-209ENST00000530322 TRAV41A0A0B4J266 112 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 CA2P00918 260 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 PPYP01298 95 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 CRYGBP07316 175 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 PSMB8P28062 276 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 TMBIM6P55061 237 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 EIF4EBP1Q13541 118 aaPredicted RBP13.19□□□□□ -0.3
SF3B2-209ENST00000530322 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 OVCH2Q7RTZ1 564 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 GPX8Q8TED1 209 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 BCL7BQ9BQE9 202 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
SF3B2-209ENST00000530322 NUBP2Q9Y5Y2 271 aa13.19□□□□□ -0.3
SF3B2-209ENST00000530322 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
SF3B2-209ENST00000530322 SHOXO15266 292 aa13.18□□□□□ -0.3
SF3B2-209ENST00000530322 CRYZL1O95825 349 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms